Gene Bamb_5421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5421 
Symbol 
ID4314310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2469765 
End bp2470376 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID638153262 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_777302 
Protein GI115360164 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0179823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAC TCGAAATCGC CGGCGTGATC GTCAGCGCGC TCGCGATCTG GCTGACCGCG 
AAGCGGCGCA TGCTGTGCTG GCCGGTCGGG CTCGCGTCGG TCGCGCTGTA CGGCTGGATC
TTCTTCGATG CGAAGCTGTA TTCCGACATG CTGCTGCAGG GCGCGTTCGC CGTGCTGCAG
GTGTACGGCT GGCGCCGCTG GATCGCGCAG CGTACGCTGG AGGCGAGCGG CGGCGCGGCG
CCGGCCGGCG ACGTCGCACC CGTCGCCGGC GTGCGGCCGC GGCAGATGCT GCCCGACCTG
ATGGCGGCCG TCGTCGGCAG CGCGCTGCTC GGCGGGATGA TGGCGCGCTG GACCGACGCC
GCGCTGCCGT TCGTCGATGC GTCGCTGACC GCGTTCAGCC TCGTCGCGCA ATACTGGACC
GCGCGGCGCT ACATCGCGTC GTGGGGGCTG TGGATCGTCG TGAACGTCGT GTACGTCGGG
ATGTTCGTGT TCAAGGAACT GTATCTGACG GCCGGGCTCT ATGCGCTGTT CATCGCGCTC
GCCGTGATCG GCTGGCGCGA CTGGAGCCGC ACGGCCGACG CGCTGCGCGC GAGCGCGAAC
CCGGCGGGCT GA
 
Protein sequence
MSPLEIAGVI VSALAIWLTA KRRMLCWPVG LASVALYGWI FFDAKLYSDM LLQGAFAVLQ 
VYGWRRWIAQ RTLEASGGAA PAGDVAPVAG VRPRQMLPDL MAAVVGSALL GGMMARWTDA
ALPFVDASLT AFSLVAQYWT ARRYIASWGL WIVVNVVYVG MFVFKELYLT AGLYALFIAL
AVIGWRDWSR TADALRASAN PAG