| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5407 |
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| Symbol | |
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| ID | 4314296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2455013 |
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| End bp | 2456242 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638153248 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_777288 |
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| Protein GI | 115360150 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.686905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGTCC CCGGCACGAG CCCGACGACG GCCACCAGCA TCGGCAACGC CGTCACGAGC
CTCGGCAACG GCGTGCAGTC GCTCGGCAGC GGCGTCGCGG CCGGCCTCGG CTCGATCGGC
GTGTCGCCGA ACCCGCTCGG CCCGACGCTC ACGTCGACCA CCGGCCTGCT GACCGGCGCC
GGCGGCGCGG TCAACAACCT CGGCAACGCG GTGACGAGCC TCGGCAGCGG ACCGCTGTCG
CCGCTCGCGC CGGCCACGAC GCTGGTCGGC GATCTGGTCA ACACGGTCGG CACCGCCGTC
AACTCGACCG CATCGGCGCT GAACACGGCG CTGAACACCG CGCCGGTCCA GCAACTCGAG
ACGCAGCTCG GCAGCGTGAT CAACCCGATC ACGAACACGC TGACCGGCGG CGTCACGACG
CCGGGCGCCA CGCAGACGCT CGGCAACGCG ACCCTGCTCG GCGCGCCGCT CAGCCGCCTG
CTGAGCACGC TCGGCAGCGG CCTCGGCCTG GCCGGCTCGC AGGTCGGCAG CGCGACCGGC
AACCCGGTCG GCACGAGCGC CGGCGGCAGC GTGTCCCAGC TCGGCAACAC GGTGGCGTCG
GCCGGCGGCC TGCTGTCCAG CGGCAGCTCG AGCAGCGGCA CCAACCCGCT CGCGCCGATC
ACCGGTCTGC TCGGTACGCT GACGGGTGGC CTCGGCGGCG GCAGCAGCTC GAGCGGATCG
GGCGGCACCA GCGGAACGAG CGGCACGAGT GGCACCAGCG GCGGCCCGCT CGCGCCGATC
ACCGGCCTGC TCGGCACGGT GACGGGTGCG CTCGGCGGCC TCGGCTCGAG TGGAACGAGT
GGCACCAGCG GCACCAGCGG CTCGGGTGTC GGCGGCCTGC TTGCGCCGGT CACCGGCCTC
GTCAACTCGC TGACCCCGCT CGGCGCCAGC CTGACCGGCA CGGTCACGAC GCCGGGCGGC
GGCCTGACAG GCAACCTCGG CGGTGCGCTG ACGAGCGGCC CCGTCGGCAC GCTGACGGGT
TCGCTGACGT CGCCGGCCGG CGCGTTGGGC GCGCTCGGCA CGGCCAGCCC GAGCGGCGCG
GCCGGCACGG TGACGACGCC CACCGGCAGC AGCACCGTCG CGACCGGCCT GACCGGCAGC
TCGACCGGTG CCGCGGGCAG CACGAACAAT CTGCTCGCGC CGGTGACGAA CCTGCTCGGC
GGTCTGCTCG GCGCCACCCC GAAGAAGTAA
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| Protein sequence | MQVPGTSPTT ATSIGNAVTS LGNGVQSLGS GVAAGLGSIG VSPNPLGPTL TSTTGLLTGA
GGAVNNLGNA VTSLGSGPLS PLAPATTLVG DLVNTVGTAV NSTASALNTA LNTAPVQQLE
TQLGSVINPI TNTLTGGVTT PGATQTLGNA TLLGAPLSRL LSTLGSGLGL AGSQVGSATG
NPVGTSAGGS VSQLGNTVAS AGGLLSSGSS SSGTNPLAPI TGLLGTLTGG LGGGSSSSGS
GGTSGTSGTS GTSGGPLAPI TGLLGTVTGA LGGLGSSGTS GTSGTSGSGV GGLLAPVTGL
VNSLTPLGAS LTGTVTTPGG GLTGNLGGAL TSGPVGTLTG SLTSPAGALG ALGTASPSGA
AGTVTTPTGS STVATGLTGS STGAAGSTNN LLAPVTNLLG GLLGATPKK
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