Gene Bamb_5387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5387 
Symbol 
ID4314276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2431139 
End bp2432128 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID638153228 
Productalcohol dehydrogenase 
Protein accessionYP_777268 
Protein GI115360130 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTG TCATTCGTTT CCATCGTGTC GGCGGCCCCG ACGTGCTGCA GATCGATACC 
GTCGACGTCC CCGCGCCCGG CCCCGGCGAA GTGCAGCTGC ATGTGAAGGC GATCGGCATC
AACCGCGCGG AAGTCATGTT CCGCAGCGGC GAATACACGA TCCAGCCGCG CTTTCCCGCG
TCGCTCGGCT ATGAAGCTTC GGGCGTGGTC GCCGCCGTCG GGCCGGATGT GACCGCGTTC
GCCGTCGGCG ACGCGGTGAG CGTCGTGCCG TCATTCTCGT TCGCCGACTA CGGGATGTAC
GGCGACGTGG TCAACGTGCC CGTGCATGCG CTCGTCCGGC ATCCGGAGAA CCTGTCGTTC
GTGGAAGCCG CCGCGACGTG GATGATGTTC GTCACGGCAT GGGGCGCGCT GATCGAACTC
GGCGGACTCG AGCGCGGCGA CACGGTGCTG ATCGGCGCCG CATCGAGCAG CGTCGGGCTC
GCGGCGATCC AGGTGGCGAA CCGCGTCGGC GCGGTGCCGA TCGCGCTGAC GCGCAGCGCG
GCGAAGCGCC AGGCGCTGCT CGATGCGGGT GCCGCGCACG TGATCGCCGG CAACCCGGCG
GACCTGCCGC AACAGGTCGC GGAACTGACG GGCGGCCGCG GCGCGCGCAT CGCGTTCGAT
CCGGTCGGCG GGCCCGCCGC GGCGAACCTG CTGCACGCGC TGCGCACGAA CGGCACGTTC
TTCCAGTACG GCGCGCTCGA CACGCGCGAC ATCCCGGTGC CGGTGATGGA CCTGCTCGCG
CGCCACCTGA CGCTGCGCGG CTACGAGCTG TTCGAGATCA CCGGCGACGC GCAGCGGCTC
GAACGCGCGA AGCGCTTCAT CGTCGACGGG CTCGCGGCCG GCGCGCTGAA GCCGTCGATC
GACCGCACGT TCGCGTTCGA CGACATCGCG CAAGCCCATC GGTACATGGA AGCCGGCACG
CAGGTCGGGA AGATCGTCGT GACCGTCTGA
 
Protein sequence
MSRVIRFHRV GGPDVLQIDT VDVPAPGPGE VQLHVKAIGI NRAEVMFRSG EYTIQPRFPA 
SLGYEASGVV AAVGPDVTAF AVGDAVSVVP SFSFADYGMY GDVVNVPVHA LVRHPENLSF
VEAAATWMMF VTAWGALIEL GGLERGDTVL IGAASSSVGL AAIQVANRVG AVPIALTRSA
AKRQALLDAG AAHVIAGNPA DLPQQVAELT GGRGARIAFD PVGGPAAANL LHALRTNGTF
FQYGALDTRD IPVPVMDLLA RHLTLRGYEL FEITGDAQRL ERAKRFIVDG LAAGALKPSI
DRTFAFDDIA QAHRYMEAGT QVGKIVVTV