Gene Bamb_5349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5349 
Symbol 
ID4314238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2390782 
End bp2391324 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID638153190 
Producthypothetical protein 
Protein accessionYP_777230 
Protein GI115360092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.570428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.76273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT CCGATTCGGC CCGCTCGATC GACGTGCTTG AAGTGCTCGG AGCGCTTGAG 
CGGCGCGTGG CGACGCTCGA CGCCGAACGC GCGGTGCGTG CGACGATCAC GCGCTACATG
GCGCTGTGCG ACGTGCCCGA GGATGTCGGC GACGGCCCGG CGCTCGCCGC GCTGTTCACG
GCCGATGCGG TGTGGGAAGG CATCGGCCCG CAGTACGCGC GCAAGTTCGG CCGCCTCGAA
GGCACGGACG CGATCGTCGC GATGCTGCGC CGCTATCTGC CGCCCGAGCC GCATTTCGTG
GCGAACCTGC ACTTCCTGAC GTCGGAGTCG ATCGACGTCG GCGCCGATCT CGCGACCGCG
CGCGGCCGCT GGATCATGCT GCAGGCGTCG CGCCACGTGG ACGGCACGGC CGAGCTGATC
GCCGCACGGC TGACCGTCGA TTTCGCGCCG GCCGAGGGCG CCGCCGCGTG GCTGATCCGC
CATTTCCGCA CCGAGCGCGT GCTCGACGGC CCGTGGCCGC TCGCCGCCGC GCCGCGGTCC
TGA
 
Protein sequence
MTGSDSARSI DVLEVLGALE RRVATLDAER AVRATITRYM ALCDVPEDVG DGPALAALFT 
ADAVWEGIGP QYARKFGRLE GTDAIVAMLR RYLPPEPHFV ANLHFLTSES IDVGADLATA
RGRWIMLQAS RHVDGTAELI AARLTVDFAP AEGAAAWLIR HFRTERVLDG PWPLAAAPRS