Gene Bamb_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5319 
Symbol 
ID4314208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2361792 
End bp2362649 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID638153160 
ProductABC transporter related 
Protein accessionYP_777200 
Protein GI115360062 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.507141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCCGACCCCT GCTCGACGTG CAGGGCCTGA CGCGCCGCTT CGACGGCGTG 
ACCGCGCTCG ACGGCGCGAG CCTGACGCTC GCCGACGGCG AGCTGCTGAG CGTGATCGGC
CCGAACGGTG CGGGCAAGTC GACGCTGTTC AACCTGATCG CGGGCGCCGA CCGGCCCGAC
GCCGGCCGCG TGACGTTCGA CGGCCGCGAC ATCACGGGCA CCGCGCCCGA ACGGCTCGCG
GCGCTCGGCA TCGCGCGCAC GTTCCAGCAC GGCCGCGTGT TCGGCAACCT GAGCGTGCTC
GACAACGTGC TGATCGGCGC GCATGCGCGG CTGCGTGCGG CGCGGCCGGG CTGGCCCGCG
CTCGGCGCGG CCGCCGAAGT GCTGCGCGCG CTGGTGCGGC CCGCGTCGGT GCGGCGCGAG
GAAGCCGAAC TGCGCGAAGA AGCCCGCGCG ATCGTCGCCG GCTTCGGCGA ACGGCTGACG
CCGCGCATCG ATCATCCGGC GCACAGCCTG TCGTATGCGA ACCGGCGGCG CGTGGAGATC
GGCCGTGCGC TCGCGCTCCA TCCGCGCCTG CTGCTGCTCG ACGAACCGAC GGCCGGGATG
AACGAGACGG AAACGGCCGA GATGCTGCAA CTGATCCAGT CGCTGAAGGC GCGCGGCCTG
ACGATCCTGC TGATCGAGCA CAAGCTCGAA CTCGTGATGC GCGTGTCCGA TCGCGTGATG
GTGCTCGACA ACGGCGTGAA GATCGCCGAA GGCGCGCCGC GCGACGTGCG GCACGACCCG
CGCGTGATCG AGGCGTACCT CGGCCGCCGC CATGCGGGCG ACGCGCCGGC CGACCGCACT
ACGCAGGCGG CCGCATGA
 
Protein sequence
MTTTRPLLDV QGLTRRFDGV TALDGASLTL ADGELLSVIG PNGAGKSTLF NLIAGADRPD 
AGRVTFDGRD ITGTAPERLA ALGIARTFQH GRVFGNLSVL DNVLIGAHAR LRAARPGWPA
LGAAAEVLRA LVRPASVRRE EAELREEARA IVAGFGERLT PRIDHPAHSL SYANRRRVEI
GRALALHPRL LLLDEPTAGM NETETAEMLQ LIQSLKARGL TILLIEHKLE LVMRVSDRVM
VLDNGVKIAE GAPRDVRHDP RVIEAYLGRR HAGDAPADRT TQAAA