Gene Bamb_5315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5315 
Symbol 
ID4314204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2355945 
End bp2357369 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content71% 
IMG OID638153156 
ProductFAD dependent oxidoreductase 
Protein accessionYP_777196 
Protein GI115360058 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT CGCTCGACGC ACTCGAAGCC CGGCTCGCGC AAGACCTGCG CTGGCTCGAC 
CTGCCCGCGC CGTCGTGGGT GCCGCCGCGA GAGGCAGACG GCACACGCGT GCTCGACGTC
GCGATCGTCG GCGGCGGCAT GGCCGGGCTC GCGGCTTCCG CCGAACTGCG CCTGCTCGGC
ATCGACAACC AGTGCGTGAT CGACCGCGCG CCGGCCGGCT ACGAAGGCCC GTGGGTCACG
TTCGCGCGGA TGGACACGCT GCGCTCGCCG AAACAGCTCG CGGGCCCCGC GCTCGGGCTG
CCTGCGCTGA CGTTCCGCGC ATGGTTCGAA GCGCAATACG GCCGCGACGC GTGGGACGCG
CTCTACAAGA TTCCGCGCAC GCAATGGATG GACTACCTGC GCTGGTATCG GCGCGTGCTC
GACCTGCAGG TGCGCAACGA CACCACGCTC GTCGCGCTGC GTCCGCGCGA CGACGGCCTG
CTCGCACTCG ATGTGCGCGG CAACGGCGAA GCGCAGACGC TGCTCGCGCG GCACGTGGTA
CTCGCAACCG GCCGCGACGG GCTCGGCGGC CCGTACGTGC CGCCCGTCGC GCAGCGCGCG
CCGCGCACGC GCTGGGCCCA TTCGTCCGAG CCGATCGATT TCGCGGCGCT CGCGGGCAAG
CGCATCGGCG TGGTCGGCGC GGGCGCGTCC GCGTTCGACA ATGCGGGCAC CGCGCTCGAA
GCCGGCGCCG CACGCGTCGA CCTGTTCTTC CGCCGCGCGG ACATTCCGCG CATCAACAAG
CTGACGGGCA TCGGCAGCCC GGGCCTCGTG CACGGCTACG CCGATCTCGA CGACGCGACG
AAATGGCGCT TCATGCATTA CGCGCTGACG TCGCAGACGC CGCCGCCGCG CGACAGCGTG
CTGCGCGTGT CGCGTCACGG GCATGCGCAT TTCCATGCGG GCAGCCCGAT CGAGACGCTT
GCCGAACAAG CGGACGGACT CGACGTGACG ACGCCGCGCG GGCGCTACAC CGTCGACTTC
CTGATCTTCG CGACCGGCTT TCATTCGGAC TGGACGACCC GCGCGGAATT CGCGTCGTTC
GGCGCGCAGG TGCGGCGCTG GAAGGATCGC TATCGACCGG AGGCGGGCGC GTGGCTCGAC
GAGCTCGCCG AGTCGCCCGA TCTCGGCCCC GCGTTCGCGT TCCAGGAGCG CGAGCCCGGC
GCGTGCGCGG CCATCACGCG GATCCACTGC TTCAACCATG CGGCGAGCCT GAGCCACGGC
AAGCTGTCCG GCGATATCCC GGCCATCAGC GCGGGCGCCG AGCGGCTCGC GCGCGGCATT
GCGAGCCGGC TGTTCGACGC CGATCGCGAT CGCCACTACG ACGCGCTCGT CGCGTACGCG
AACGCGGAAC TGCAAGGCGA TGAATGGCGC GACGCCGATG CGTGA
 
Protein sequence
MTTSLDALEA RLAQDLRWLD LPAPSWVPPR EADGTRVLDV AIVGGGMAGL AASAELRLLG 
IDNQCVIDRA PAGYEGPWVT FARMDTLRSP KQLAGPALGL PALTFRAWFE AQYGRDAWDA
LYKIPRTQWM DYLRWYRRVL DLQVRNDTTL VALRPRDDGL LALDVRGNGE AQTLLARHVV
LATGRDGLGG PYVPPVAQRA PRTRWAHSSE PIDFAALAGK RIGVVGAGAS AFDNAGTALE
AGAARVDLFF RRADIPRINK LTGIGSPGLV HGYADLDDAT KWRFMHYALT SQTPPPRDSV
LRVSRHGHAH FHAGSPIETL AEQADGLDVT TPRGRYTVDF LIFATGFHSD WTTRAEFASF
GAQVRRWKDR YRPEAGAWLD ELAESPDLGP AFAFQEREPG ACAAITRIHC FNHAASLSHG
KLSGDIPAIS AGAERLARGI ASRLFDADRD RHYDALVAYA NAELQGDEWR DADA