Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5303 |
Symbol | |
ID | 4314192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2342537 |
End bp | 2343667 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153144 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_777184 |
Protein GI | 115360046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.728063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCC CACCCCTCAA TACACCCGCC GCATTGATCG ACGTCGATCG CATGCGCAAC AACATCGCGC GCATGCAGGC GCATCTCGAC GCGCTGGGCG TCAAGTTCCG GCCGCACGTG AAGACCACCA AGTGCCAGCA GGTCGTCGAC GCGCAGATCG CGGCCGGCGC GCAGGGCATC ACAGTGTCGA CGCTGAAGGA AGCCGAACAG TTCTTCGCGG CCGGCGTGCG CGACATCGTC TACGCGGTCG GGATGATTCC GGCCAAGCTG GGCCAGGCGC TGGCGCTGCG CCGCCAGGGC TGCGACCTGA AGATCGTCGC CGACAGCCTG GAGACCGCGA ACGCGATCGC CGAATTCGGG CGCGAGCACG GCGAGCGCTT CGACGTGTGG ATCGAGGTCG ACGTCGACGG CCACCGCTCG GGGATTCGGC CCGACGATGC CCTGCTGATC GACGTCGGCC GCGCGCTGGT AGATGGCGGC ATGGCGCTCG GCGGCGTGCT CGCTCACGCC GGCTCCAGTT ACGAATACGA CACGCGCGGC GCACTGGTCG CGATCGCCGA ACAGGAGCGC AGCCGCACCG TGCGCGCCGC CGAGCGCCTC CGGGCGGCCG GCCTGCCCTG CCCGGTGGTG AGCATCGGTT CGACGCCGAC CGCGCTGTCC GCCGCGAACC TCGACGGGGT GACGGAAGTC CGCGCAGGCG TCTACGTGCT GTTCGACCTC GTGATGCACA ACATCGGCGT GTGCGCGCAG GCCGACATCG CGCTGTCGGT GCTGACCACC GTCATCGGAC ACCAGGAAGA AAAAGGCTGG GCCATCGTCG ACGCGGGCTG GATGGCGATG AGCCGCGATC GCGGCACCCA GCGGCAGGCG CGGGATTTCG GCTACGGGCA GGTGTGTACC GAAGACGGCG ACGTGCTCGG CGAGTATGTG ATGAGTTCGG CCAATCAGGA GCACGGCATC GTGTCGCGCA TCGATACGCC CGACACGCGC ATCGCGCAGC GGTTTCCGAT CGGTACCCGT TTGCGGATCC TCCCGAACCA CGCGTGCGCG ACCGCTGCGC AACATCCGGA ATACCACGCG CTGAGCGGCG ACGGCGCGGT ACAGACCTGG CCGCGCTTCT ACGGGTGGTG A
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Protein sequence | MGIPPLNTPA ALIDVDRMRN NIARMQAHLD ALGVKFRPHV KTTKCQQVVD AQIAAGAQGI TVSTLKEAEQ FFAAGVRDIV YAVGMIPAKL GQALALRRQG CDLKIVADSL ETANAIAEFG REHGERFDVW IEVDVDGHRS GIRPDDALLI DVGRALVDGG MALGGVLAHA GSSYEYDTRG ALVAIAEQER SRTVRAAERL RAAGLPCPVV SIGSTPTALS AANLDGVTEV RAGVYVLFDL VMHNIGVCAQ ADIALSVLTT VIGHQEEKGW AIVDAGWMAM SRDRGTQRQA RDFGYGQVCT EDGDVLGEYV MSSANQEHGI VSRIDTPDTR IAQRFPIGTR LRILPNHACA TAAQHPEYHA LSGDGAVQTW PRFYGW
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