| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5242 |
|---|
| Symbol | |
|---|
| ID | 4314132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2282724 |
|---|
| End bp | 2283752 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638153084 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777124 |
|---|
| Protein GI | 115359986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.688518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.782191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAATC CGAATATCGA CAGCCTGCTG ACGAAGCTGC TGGGACAGGC AAAGACCGAC
GCCCTGTTCG CCACCCTGAA CATGCCGGCC ATCCTCGACG AATGGGAAAC CGACGTCGTC
ACGCGCGCGG AAATCGCGCA GGCGATGAAC ATGGCGCTGT TCGAAGGGCT GCTCGAACGT
TCGGCGAACG GCCGCGCGTA CACCGCCGAA GCCATCGAAA ACGGCGGTTC GGTCTACTTC
GACCACGGCG CGCTGCGCAC GGTGCGCTGG CCGCACACGG GTGCGCTGCC GCCGGGCGAA
GCCGCGTTCA CGCGGATCCT GCGTCCGCTC GGCTTCCGCC TGAACGGCCG TTATCCGCTC
GACAAGCTCG GCATGACCGG CCGCGCGTAC GCGCATGAAG ACGCGCCGGA CGAGATCGCG
CAGTTCTTCG TCAGCGAACT GCATCCGGAA CGTTTCTCGA AGGAATTCCA GCAGGCCGTG
ACGAACGTCG TGAGCTCGTC GCGCGATCCG CTGTCGCCGG CCGCCGTCGC GCTGCTGTGG
GAGATCGAGC GCGAAGGGTG GCTACCGATC GACGCCGCGC ATGCATTGCT GCCCGAGATT
GTCGGCGCGT TCGCGCGCCA GCACGACGTG CCGAACGAAC TCGACTACGA GACGCTGCTG
CTCGAATCGG CCGAGATGGC ATGGATCGCG ACCGAAGGCA ACGCGTTCAA CCATGCGACC
GATCGCGTGA CCGACGTGTT CAAGCTGTCC GACGACGAGA AGGCGAAGGG GCGGCCGATG
AAGCCGGAAG TCGAGCGCTC GCGTTCGGGC CGCGTGTTCC AGACCGCGTA TCGCGCGGAC
ATCGTCGAGC GCGAGTTCCG CACGCGCGAC GGCGGCACGG TGAAGCGCAA CGTGCCGGGC
TCGTTCTATG AATTCATCAC GCGTCGTCGC ACGTTCGACC AGGCGGCGCG GTGCTGGGTG
ACGGACCTGC GTTTCGATGC GGGCAACGCG CAGGGCATCT TCAAGATGAC GGCGAACGCG
GCGAACTAA
|
|---|
| Protein sequence | MRNPNIDSLL TKLLGQAKTD ALFATLNMPA ILDEWETDVV TRAEIAQAMN MALFEGLLER
SANGRAYTAE AIENGGSVYF DHGALRTVRW PHTGALPPGE AAFTRILRPL GFRLNGRYPL
DKLGMTGRAY AHEDAPDEIA QFFVSELHPE RFSKEFQQAV TNVVSSSRDP LSPAAVALLW
EIEREGWLPI DAAHALLPEI VGAFARQHDV PNELDYETLL LESAEMAWIA TEGNAFNHAT
DRVTDVFKLS DDEKAKGRPM KPEVERSRSG RVFQTAYRAD IVEREFRTRD GGTVKRNVPG
SFYEFITRRR TFDQAARCWV TDLRFDAGNA QGIFKMTANA AN
|
|---|
| |