| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5192 |
|---|
| Symbol | |
|---|
| ID | 4314083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2222481 |
|---|
| End bp | 2222876 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638153035 |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_777075 |
|---|
| Protein GI | 115359937 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.260163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGA AGATCACGAT GCTTACGCGG TTCGTCCGCG GCGTCCGCTT CGTCGCGGCC
GGCGCGCTGA TCGCCGCCGC GCCGGTTGCG GCCTGGGCGC ACGGCAAGCT GGAGAGCGCG
ACGCCCGCGA CCGGCAGCAC GGTCGACACC GCGCCCGATA CGTTGCGGCT CGCGTTCAAC
GAAGACCTCG AGCCCACCTT CAGTTCGGTG AAGGTGTCGG ACGCGAACGG CAAGCCCGTC
GCGCACGACA GCGCGAAGGT CGATCCGGCG ACGCCGCGCG TGATGACCGT CGCGATGCCG
AAGCTCGCGC CGGGTGCGTA CACGGTGCAA TGGGTGGCGA TGACGGCCGA CGCGCATCGC
ACCAAAGGCA CCTACACGTT CAAGGTGAAA GGGTGA
|
|---|
| Protein sequence | MHTKITMLTR FVRGVRFVAA GALIAAAPVA AWAHGKLESA TPATGSTVDT APDTLRLAFN
EDLEPTFSSV KVSDANGKPV AHDSAKVDPA TPRVMTVAMP KLAPGAYTVQ WVAMTADAHR
TKGTYTFKVK G
|
|---|
| |