Gene Bamb_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5177 
Symbol 
ID4314068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2206435 
End bp2206791 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content67% 
IMG OID638153020 
ProductHxlR family transcriptional regulator 
Protein accessionYP_777060 
Protein GI115359922 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA GTGCGACAGG ATGTTCCGTG GAAGAGGCGA TGCGCATGCT CGGCGGCCGC 
TGGCGACTGC TGATCGTGTC GTATCTGCTC GACGGGCCCA GGCGCTTCAG CGACCTGCGC
CGCGACATGC CCGGTATCTC GCAACGGATG CTGACGCTCG ATCTGCGCGC GCTCGAGGAC
GCCGGCTTCG TGCGGCGCAC CGTGTATCCG GAAGTGCCGG TGCGCGTCGA GTACGATCTG
ACCGCGGACG GCGACCGGCT ACGGCCCGTC GTCGAGGTCA TGCGCGAATT CGGGTTGTGG
CTGAAGGCGC GCGATGCGCG CTGCGGCGTC GCGACGCAAG CGGCCTTGCA CAATTGA
 
Protein sequence
MKTSATGCSV EEAMRMLGGR WRLLIVSYLL DGPRRFSDLR RDMPGISQRM LTLDLRALED 
AGFVRRTVYP EVPVRVEYDL TADGDRLRPV VEVMREFGLW LKARDARCGV ATQAALHN