| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5172 |
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| Symbol | |
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| ID | 4314063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2202212 |
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| End bp | 2203048 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153015 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_777055 |
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| Protein GI | 115359917 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.245144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCG ACGTGAACTC CTCCCACCGC GACACCGATC GCTTCAACGT GTCGTTCAAG
GCGCTCGGCG AATTGATCGA GACGGTCGGC ACGCCGCACT TCGTGCCGCG TCTCGCGCAA
CTGCTGAACG ATGTGGTGCC GCTCGACGTC GCGCACATCG AACGCTCGCG CGTCGATGGC
GCGATGCCGA CCGGCTATCG CTGCGAATGG ATCGGCAGCA GCGGCATCGG CGCGGAGACT
GATACCGCCG AAATCTCCGA CGTGATGACG CTCTACTACG AGCGCTTTTT CGACAGCGAT
CCGCTGTTCG CGGGGCTGCG CGGCAAGACG GGCACGATGC TCGTCGTGCG CGACATCGCG
GCGATCCCGC CCGGCGAGTT CCGCCAGCGA CTGTTCGACG ACGTGCGTAT CGGCCACGAA
TGCGTGCTCG CGCGCGGCAC CCGCTATGCG CAGCATTCGA TCGCGCTCGA ACGCGGCCGC
GACCGCCCGC CGTTCACGCT CGCCGAGATG AGCCACTTTC GCAGCATCAG CGACGTGCTG
TTCCCGTTGC TCGAGCTGCA CGCGTCGACC ACCGCCGCGC GGCGCATCGC GCATCCGACG
CCCGACGTGC ATCCGCTCGC GCAGTTCGAT GCGCGGATCG CGGCCGACGG CGTGAAGCTG
TCGAAGCGCG AATACGAAAC CTGCAAGCAT CTCATCTCCG GCAAGACCGT GCCGGAGACC
GCCGAGATCC TCGGCGTGCG GGTCGCGTCG GCCGAGTCGT ACGTGAAGCG CGCGTTCGCG
AAGCTCGGCG TGCGCACGAA GCGCGAGCTC GCCGCATGGG GCGCGATCGT CGGCTGA
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| Protein sequence | MLPDVNSSHR DTDRFNVSFK ALGELIETVG TPHFVPRLAQ LLNDVVPLDV AHIERSRVDG
AMPTGYRCEW IGSSGIGAET DTAEISDVMT LYYERFFDSD PLFAGLRGKT GTMLVVRDIA
AIPPGEFRQR LFDDVRIGHE CVLARGTRYA QHSIALERGR DRPPFTLAEM SHFRSISDVL
FPLLELHAST TAARRIAHPT PDVHPLAQFD ARIAADGVKL SKREYETCKH LISGKTVPET
AEILGVRVAS AESYVKRAFA KLGVRTKREL AAWGAIVG
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