Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5135 |
Symbol | |
ID | 4314026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2165938 |
End bp | 2166675 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152978 |
Product | AzlC family protein |
Protein accession | YP_777018 |
Protein GI | 115359880 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.948327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGTA GCGTTTCAAC GTCGTCCGGG CTTCGCGACA AGTCCGCCCA GGTCGCCGAG ATGGGTCGCG GATTGCGCGC GGCGCTGCCC GTTATGCTGG GTTTCGTGCC GTTCGCGCTG GTGCTCGGCG CGCAGGCCGC GCAAAAAGGG CTGAGCCTGT TCGAGGTGCC GATGATGACG GGCCTCAATT TCGGCGGCGG CTCCGAATTC GCGGCGATCC ATCTGTGGAC GTCGCCGCCG CACATCGCGC TGATCGTCGC GATGTCGTTT CTCGTGAATT CGCGTCACAT CCTGATGGGC GCGGCGTTCG CGCCGTATAT CCGGCGCCTG CCGCGCCGTC GCGCGTTCGC CGCGCTGTTC TTCATGTGCG ACGAAAGCTG GGCGATGTCG CTCGCCGACG CGCGCTCGCG CTCGGCCACG CACATCAGCG TCCCCTATTA CGCGGGCGTG TGCTCGGGGC TGTACCTGAC GTGGATCTCG ATGACGACGC TCGGCGCGGC GGTCGGCCCG ACGATCGGCA ACGTCGAGCA GTACGGCTTC GACATGGCGT TTACGGCCGT GTTTCTGGTG CTGCTGCGCG GGATGTGGAA GGGCATGCGC GCGAGCCGTC CGTGGTTCGT GAGCCTCGTC GTCGCGGCCG CCACGCACCT GGCCGTGCCC GGTGCGTGGT ACGTCGCGGC CGGCGCGTGC GCGGGGCTGG TCGCCGCGCT GCTGTGGGAG CCGCGCGATG CTGCCTGA
|
Protein sequence | MSSSVSTSSG LRDKSAQVAE MGRGLRAALP VMLGFVPFAL VLGAQAAQKG LSLFEVPMMT GLNFGGGSEF AAIHLWTSPP HIALIVAMSF LVNSRHILMG AAFAPYIRRL PRRRAFAALF FMCDESWAMS LADARSRSAT HISVPYYAGV CSGLYLTWIS MTTLGAAVGP TIGNVEQYGF DMAFTAVFLV LLRGMWKGMR ASRPWFVSLV VAAATHLAVP GAWYVAAGAC AGLVAALLWE PRDAA
|
| |