| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5130 |
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| Symbol | |
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| ID | 4314021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2161630 |
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| End bp | 2162982 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152973 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_777013 |
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| Protein GI | 115359875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.768223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAC TCGCCCTGCT GGCCGACGCC GACCGGCGCG CGCATGCGTA TCTCGCCGCG
ACGAACGAAC GGCGCGCGTA TCCCGACGCA GCCGCGCTCG CCGGTCTTGC GGCCTTCGAC
GAGCCGCTGC CCGACACGGG CCGTCCGGCC GACGACGTGC TGCGCTTGCT CGACGAGCAC
GGCACGACCG CGACCGTCGC ATCGAACGGC CCGAACTACT TCGGCTTCGT GATCGGCGCG
ACGCTGCCGG CCGCGGCGGC GGCCGAGCGG CTGATGCTCG CGTGGGACCA GTGCGCGTCG
TCGTTCGCCA ATTCGCCGGT GGCCGCGACG ATCGAGCGGC AGGCCGCGCG CTGGATCGTC
GACGTGCTCG GGCTGCCCGA GGGCAGCGCG GTCGGCTTCG GCACGAGCGC GACGGCCTGC
ACGCTCGTCG CGCTGGTCGT CGCGCGGCGT GCGCTGCTCG CGCGCAAGGG CTGGGACGTC
GACGAGGACG GCCTGATCGG CGCGCCCGAG GTCAAGGTGG TGGTCTCCGA GCTCGTGCAC
GTCACGGTGA AGAAGGCGCT GCGCGTGCTC GGCTTCGGGA TGAAGCGCGT CATCGTCGCG
CCGGTCGACA CGCACGGCCG CATCGATTCC GCGCAGTTGC CGCCGCTCGA CGACATGACG
ATCCTCTGCG TGCAGGCCGG CGAAGTGAAT ACCGGCGAAT TCGATCCGTT CGCGGCATTG
ATTCCGCTCG CGAAGGCCGC CGGTGCGTGG GTGCACGTGG ACGGCGCGTT CGGGTTGTGG
GCGCGCGCGT CGTCCAAGCG CGCGCTGACC AACGGCGTCG ACGGCGCGGA CAGCTGGACG
ACCGACGGCC ACAAGTGGCT CAACACGCCG TACGACGCCG CGATGGTGAT CTGCCGCGAC
GCGGCCGCGC TCGCGACCGC GATGAACAGC GACGCCGTCT ACCTGAGCGG CGCGCAGGAC
GCGCAGAAAA ACCTGAACCT CGAATTCTCG CGGCGCGCGC GCGGCATTCC GGTGTGGGCC
GCGCTGCGCG CGCTCGGCCG CGCCGGCGTG GCGACGATGA TCGAGCGGCA TTGCGCGCAG
GCCGCGCGTG TCGCGGACGG CCTGCGCGTG GCGGGCTACG ACGTGCTGAA TCGCGTCGTG
CTGAATCAGG TGCTCGTGCG CGCCGGCACT GACGACGAGA CGACCGCGAT CCTTCAGGCC
GCGCAGGATT CGGGCGACGT ATGGTTCGGG CAGACCGTGT GGCAGGGACG GCCGGCGTTC
CGGATCAGCG TGTCGTCGTG GCGCACGGAG GACCAACACA TCGATCGTCT CGTCGCGTTG
CTGACGAAGC TGCGCGGCGT GCACGTGGGC TGA
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| Protein sequence | MDELALLADA DRRAHAYLAA TNERRAYPDA AALAGLAAFD EPLPDTGRPA DDVLRLLDEH
GTTATVASNG PNYFGFVIGA TLPAAAAAER LMLAWDQCAS SFANSPVAAT IERQAARWIV
DVLGLPEGSA VGFGTSATAC TLVALVVARR ALLARKGWDV DEDGLIGAPE VKVVVSELVH
VTVKKALRVL GFGMKRVIVA PVDTHGRIDS AQLPPLDDMT ILCVQAGEVN TGEFDPFAAL
IPLAKAAGAW VHVDGAFGLW ARASSKRALT NGVDGADSWT TDGHKWLNTP YDAAMVICRD
AAALATAMNS DAVYLSGAQD AQKNLNLEFS RRARGIPVWA ALRALGRAGV ATMIERHCAQ
AARVADGLRV AGYDVLNRVV LNQVLVRAGT DDETTAILQA AQDSGDVWFG QTVWQGRPAF
RISVSSWRTE DQHIDRLVAL LTKLRGVHVG
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