Gene Bamb_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5070 
Symbol 
ID4313961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2093857 
End bp2094774 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID638152913 
Productdihydrodipicolinate synthetase 
Protein accessionYP_776953 
Protein GI115359815 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.903203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC GCTACCAGGG CGTCTTTCCG GTTGCGCCGA CCATCTTCGA TGCGCACGGC 
GCGCTCGACC TCGACGGCCA GCGCCGCTGC CTCGACTTCA TGATCGATGC CGGCTCGCAG
GGCATCTGCA TCCACGCGAA CTACTCGGAG CAGTTCGCGC TCGGCGACGA TGAACGCGAG
CTCATCACGC GCACGACGCT CGAGCACGTC GCCGGCCGCG TGCCGGTGAT CGTCACGACG
TCGCATTTCA GCGCGCGCCT CTGCGCGGAG CGCAACCGCC ACGCGCAGGC ATGCGGCGCC
GCGATGGTGA TGGTGATGCC GCCGTACCAC GGCGCGACGT TCCGCGTGCC GGAAGCGCAG
GTGCGCGCGT TCTTCCGCGA AGTCGCCGAT GGCCTCGACA TTCCGCTGAT GATCCAGGAC
GCGCCGGCGA GCGGCGTCGC GCTGCCTGCG TCGTTGCTCG CGACGCTCGC GCGCGAGATC
GACGCCGTGT CGTACTTCAA GATCGAGACG GCCGGCGCCG CGTCGAAGCT GCGCGAGCTG
ATCGCGCTCG GCGGCGACGC GATCGAAGGG CCGTGGGACG GCGAGGAAGG CATCACGCTG
CTCGCCGATC TCGATGCCGG CGCGACCGGC GCGATGACGG GCGGCGGCTA TCCGGACGGT
ATCCGCCGGA TCACCGATGC GTATTTCGCC GGACGCCGCG ACGAAGCCTG CGAGCAGTAC
GCGCGCTGGC TGCCGCTGAT CAACTACGAG AACCGCCAGT CGGGTTTCCT GACCGCGAAG
GCGCTGATGA AGGAAGGCGG CGTGATCGCG TGCGACCGGC CGCGCGCGCC GTGGCCCGAG
TTGCACCCCG AGGTACGAGC GGGCCTGCTC GACGCGGCGC GGCGGCTCGA TCCGCTCGTG
CTGCGCTGGG GACGCTAG
 
Protein sequence
MNARYQGVFP VAPTIFDAHG ALDLDGQRRC LDFMIDAGSQ GICIHANYSE QFALGDDERE 
LITRTTLEHV AGRVPVIVTT SHFSARLCAE RNRHAQACGA AMVMVMPPYH GATFRVPEAQ
VRAFFREVAD GLDIPLMIQD APASGVALPA SLLATLAREI DAVSYFKIET AGAASKLREL
IALGGDAIEG PWDGEEGITL LADLDAGATG AMTGGGYPDG IRRITDAYFA GRRDEACEQY
ARWLPLINYE NRQSGFLTAK ALMKEGGVIA CDRPRAPWPE LHPEVRAGLL DAARRLDPLV
LRWGR