Gene Bamb_5069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5069 
Symbol 
ID4313960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2092469 
End bp2093761 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID638152912 
Productmajor facilitator transporter 
Protein accessionYP_776952 
Protein GI115359814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TGAACCCCGC CACCCCGGCC TATGAAGCCG GCGAAGCCAT TCCGCGCCGC 
CGCTGGCTGC GCGTGATTCC GCCGCTGCTG CTCGCGTGCA TCGTTTCGTA CATGGATCGC
GTGAACATCG CGTTCGCGAT GCCGGGTGGG ATGAACGCCG ATCTCGGCAT GGACGCGACG
ATGGCCGGCC TCGCCGGCGG CATCTTCTTC TTCGGCTACC TGTTCCTGCA GATCCCCGGC
GGCCGGCGCG CGGCGCTCGG CAGCGGCAAG ACCTTCATCG CCTGGTCGCT CGTGAGCTGG
GCCGTGCTGT CGGTGCTGAC CGGGCTCGTC ACCCACACGT GGCAGTTGCT GACGCTGCGC
TTCCTGCTCG GCGTGGCCGA GGGCGGGATG CTGCCCGTCG TGCTGACGAT GGTCAGCCAC
TGGTTTCCCG ACCGCGAACG CGGCCGCGCG AACGCGATGG TCATCATGTT CGTACCGCTC
GCCGGCATGA TCACCGCGCC GCTGTCCGGC TTCATCCTCG CCGCGTACGA TTGGCGTCAC
CTGTTCTTCA GCGCCGGCGC GCTGTCGCTG CTGTGCCTGT TCGCGTGGAT GATGTTCGCC
GACGACGGCC CGCAAACCGC GCGCTGGGTG TCGCCGCGCG AGAAGGCGTA CATCCTCGAC
GCGCTGCGCG ACGAACAGGC GCGCAAGCAG GCCGCCGGCT CGCCGGCCGC CGCGTCGTTC
GGCGCGATAC TGCGCAACCC GACGATCTGG CTGCTGATCG CAATCAACTT CTGCTATCAG
GTCGGCATCT ACGGCTATAC GATGTGGCTG CCGACCTTGC TGAAAAACCT TACGCACGGC
GGGATGGGCA AGGTCGGCCT GCTCGCGATG CTGCCGTATG TCGCGATGGT GATCGGGATG
TTCGCCACGT CGTATTTGTC AGACCGAACC GGCAAGCGCC GCCTGTTCGT GCTGCTGCCG
CTCGTCGGCT TTGCCGCGTG CCTCGCGCTG TCGGTTCTCA CGCATGCATC GATGGTCGTG
TCGTTCGCGT TCCTGATCGG TTGCGGCTTC TTCCTGCAGG CGGCCGCCGG CGTGTTCTGG
GCGATTCCGC CGAAGCTGTG CAGCGTCGAG ACGGCCGGCA GCGCGCGCGG CCTGATCAAC
GCGCTCGGCA ACCTCGGCGG CTTCTGCGGC CCGTATGCGG TCGGCGTGCT GACCCAGCAC
GTGAGCGCGG CGGCCGGTGT GTACAGCCTC GCCGTCACGC TCGCGGTGGC CGGTCTGCTC
GCGTTGACGC TGCCGAAGCG CTGCGAAGGC TGA
 
Protein sequence
MNLLNPATPA YEAGEAIPRR RWLRVIPPLL LACIVSYMDR VNIAFAMPGG MNADLGMDAT 
MAGLAGGIFF FGYLFLQIPG GRRAALGSGK TFIAWSLVSW AVLSVLTGLV THTWQLLTLR
FLLGVAEGGM LPVVLTMVSH WFPDRERGRA NAMVIMFVPL AGMITAPLSG FILAAYDWRH
LFFSAGALSL LCLFAWMMFA DDGPQTARWV SPREKAYILD ALRDEQARKQ AAGSPAAASF
GAILRNPTIW LLIAINFCYQ VGIYGYTMWL PTLLKNLTHG GMGKVGLLAM LPYVAMVIGM
FATSYLSDRT GKRRLFVLLP LVGFAACLAL SVLTHASMVV SFAFLIGCGF FLQAAAGVFW
AIPPKLCSVE TAGSARGLIN ALGNLGGFCG PYAVGVLTQH VSAAAGVYSL AVTLAVAGLL
ALTLPKRCEG