Gene Bamb_5029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5029 
Symbol 
ID4313920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2047895 
End bp2049115 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID638152872 
Productmajor facilitator transporter 
Protein accessionYP_776912 
Protein GI115359774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.973575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCCC AGCATCAAGC CTTTTTCCAT TCGCTTTTCC TTGCCCGCCT CGCCGACCAG 
ATTCTGTTGT TTCTCGTGCC GCTGGTCATC TTTCAGATGA CAGGACGCGT GTCCTGGTCG
GGCATCGCGT TTTCGCTCGA AACACTGCCG AGATACCTGT GCTTCCCGTT TCTAGGTGCG
CTTTGCGACC GGTATTCGCC CACGAAACTG ATGCGCGTCA GTCAGGTTCT CCGCGCGGCA
GTATGCGTCG CGGGCGTCGT CGCCTACGAC CTCGTCGGCG GTATCGGATG GCTGATCGCG
CTGTCCGCGT TGTGCGGCAT GCTGACGAGT CAGGGCATCG TTGCGCGCGA GGTGATGCTG
CCGCAGATAT TCAGCAGCCA TCGCTTCGAA AAAGTGTTGT CGTATTCGCA ATTGGCCGAC
CAGCTTGGTC TGGTGCTCGG CCCCATGCTC GCGGCGATCA TGCTGTCGTG GTGGCGCTGG
GAATTCGTCG TGGTGGCCGC GGCCGTGCTG TTTGTCACAG CCGACGTCGC GCTCGCCTAT
TGGCAAAAGG CCAGCGCGTT CGAATTCGTG ATGCCGGAAG GCACGCACGG CACCTGGTTC
ACGCCGATCA AGACGGCCTT GTCTCACGTC ATCCGTCTTC CTGGCCTCAA GTCCGTCATC
ATGTTGGCTG CCGCGGAGAA CCTCGTGATC GGCGTCACGC TCGCGACATC CGCCGCGATG
GTCACCGGCT TTCATCACGA AAGCGGACGC TATTACGCAG GACTGCAAAC GGTAGGCGCG
TGCGTGACGA TCGCGATTCT GCTGACGACG GCGAGGTTGC ATGTCCCGAG GCGCGTCCTC
GGCCTCGTCG GCTTCGGTTC GATCTGTATC GGCGGCGTTA TCGCGGCAGC CAGCCCGGGA
ATTCCGGGGT ACGTTTTCGG CTTCCTCCTG ATCGTCGGAT TCGACAAGAT GTTCAACGTG
TACATCCGGA GCACGCGGCA GAAGATCATC CCCGCGCGCG ACTACGGCAA GACGACGGGA
GTCGTCATCC TCCTCAACAA CATGACACAG CCGCTCGCGG GCGTCGCGGT AGGCGCGTTC
TCGACGCGTT TCGGACCAGA CACGGTGATC ATGGTGCTGT CCGTGTGCAT GGGTTGCCTC
GGGTTGCTGG TCTCGCTCGC GCCCCGCATT CGAAAAGGCC ACAGCCCCTC GTCGGCCTCG
GTGTCCTCAC ATGAAGGCTG A
 
Protein sequence
MRAQHQAFFH SLFLARLADQ ILLFLVPLVI FQMTGRVSWS GIAFSLETLP RYLCFPFLGA 
LCDRYSPTKL MRVSQVLRAA VCVAGVVAYD LVGGIGWLIA LSALCGMLTS QGIVAREVML
PQIFSSHRFE KVLSYSQLAD QLGLVLGPML AAIMLSWWRW EFVVVAAAVL FVTADVALAY
WQKASAFEFV MPEGTHGTWF TPIKTALSHV IRLPGLKSVI MLAAAENLVI GVTLATSAAM
VTGFHHESGR YYAGLQTVGA CVTIAILLTT ARLHVPRRVL GLVGFGSICI GGVIAAASPG
IPGYVFGFLL IVGFDKMFNV YIRSTRQKII PARDYGKTTG VVILLNNMTQ PLAGVAVGAF
STRFGPDTVI MVLSVCMGCL GLLVSLAPRI RKGHSPSSAS VSSHEG