| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4999 |
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| Symbol | |
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| ID | 4313890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2019393 |
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| End bp | 2020484 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152842 |
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| Product | outer membrane protein (porin) |
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| Protein accession | YP_776882 |
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| Protein GI | 115359744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.362759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA AGACCCTGCT GGCCCTCGCG GCCTGCACGA TCCCCGCCGC GGCCTTCGCG
CAGAGCAGCG TGACGATGTT CGGGCTGCTG GATGCCGGCA TCAGCTATGT CAGCAACGAA
GGCGGTCACG GCAACGCGAA ATTCGACGAC AACATCTTCT TCCCGAACCT GCTCGGCTTC
GAAGGCAAGG AGGATCTCGG CGCCGGCACG CGCGCGATCT TCCGGCTCGT CAATCAATTC
TCGCTCGCGA ACGGCTCGAT GATCGGCGGC GGGTTGTTCG CGCGCACGGC CTATGTCGGG
CTGCAGAACG ACCGCTACGG CACGCTGACG CTCGGCAACC AGTACGAGTT CATGGTCGAT
TCGCTGGCCG CGAGCGGCAA CGAGATCGCG CAGGATCTCG TCGGGCTGTA CGGCTTTCGC
AACGGGCCGT TCGACAAGCT CGCGCTGTCG AACAACCCGA CCGGCGCATT CGACTGGGAC
CGCGTCGCGG GCAGCAATCG CGTCGCGAAT TCGGTCAAGT ACACGAGCGC GTCGATCTCG
GGCCTGACCT TCGGCGCGCT GTACGGCTTC GGGAACGTCG CGGGGTCGGT CGGCGCGAAC
AACACGGTCA GCGTCGGTGC GAGCTACGAC AACGGCCCGT TCGGCGCGGG CGCGGCCTAT
ACGAACCAGA AGTACGGCGC GGCGGACGGG CGGCCGGCCA CCACCGTGCG CAACTGGAGC
GCGGGCGCGC ACTACATGCT CGGCACGGTC ACGGCGAAGG CACTGTTCAC GACCGTGCAC
AACGCGTGGA ATGGTGCGGG CGCGTGGTCT GCAGAGACCG GCGCCGCTTG GCATCCGTCG
CCGGTCTGGG TGATCGGGGC GAGCTACACG TACATGAAGG GCAACGATAC GCTCGATAAC
GCGCATGCGC ACCAGCTCCT GGCCGCCGTC CAGTACTGGC TGTCGAAACG CACGATGGTG
TACGTCGCGG GCGTGCATCA GCGCGCGAGC CGCGGCAGCC ACGCGCAGAT CAACGGCGTG
ATGGACGCGA ACGGCGCGTC GAGCGGCGCG CTGCAGTCGG TCGCGCGGAT CGGGTTCAGT
ACGCGGTTCT GA
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| Protein sequence | MTKKTLLALA ACTIPAAAFA QSSVTMFGLL DAGISYVSNE GGHGNAKFDD NIFFPNLLGF
EGKEDLGAGT RAIFRLVNQF SLANGSMIGG GLFARTAYVG LQNDRYGTLT LGNQYEFMVD
SLAASGNEIA QDLVGLYGFR NGPFDKLALS NNPTGAFDWD RVAGSNRVAN SVKYTSASIS
GLTFGALYGF GNVAGSVGAN NTVSVGASYD NGPFGAGAAY TNQKYGAADG RPATTVRNWS
AGAHYMLGTV TAKALFTTVH NAWNGAGAWS AETGAAWHPS PVWVIGASYT YMKGNDTLDN
AHAHQLLAAV QYWLSKRTMV YVAGVHQRAS RGSHAQINGV MDANGASSGA LQSVARIGFS
TRF
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