| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4997 |
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| Symbol | |
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| ID | 4313888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2016196 |
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| End bp | 2017794 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152840 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_776880 |
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| Protein GI | 115359742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA GAACTTTCGA TTACATCGTC ATTGGGGCCG GCTCGGCGGG CTGCACGATC
GCGACCCATC TCGTCGAGCG CGGTCTGGGC ACCGTGCTGC TGCTGGAAGC GGGCGGCCAC
GACAAGGATC TGTTCATCCA CATGCCGGGC GGGCTGGCGA AGGCGATTCC GCGCTACACG
TGGCCGTATG CGGCCGAGCC GTCGGACGAC GTGAAGGGCC GCTCGATCGC GGTGCCGCAG
GGGCGCGTGC TCGGAGGCTC CAGCTCGGTC AACGGAATGC TGTACGTGCG CGGGCACCGC
AACGACTACG ACCGCTGGGA GACCGAGTTC GGCTGCAAGG GCTGGGGCGC GGACGACATG
CTGCGCTACT TCGCGAAGGC CGAGAACAAC GAATCGCTGA CGGCGCCCTA TCACGGCAAC
AACGGGCATC TGCAGGTCAC CGAGATCCGC TATCGCCATC CGCTGTCGCA GGCGTTCGTG
CGGGCGGGCC AGCAGATGGG GCTCGACTAC CTGGTCGACT ACAACGGCGA GCGGCAGCAG
GGCGTCGGGT TCTATCAGGC GACGATCTTC AACGGCGAGC GCGGCTCCAC GGCGGCGACC
TACCTGAGCG CGATCCGCAA CCGTCCGGAA CTCAGCCTCG AAGTCGATGC GCTGGTCGAG
CGCGTGGAAA TCGAAGGCGG CCGCGCGACC GGCGTCACGT ATCGGCAGGG CAACCGTCGC
GTGACGGCGC GCGCGCGGGC CGAAATCATC GTGTCGGCCG GCGCGATCGG CTCGCCGAAG
ATCCTGCAGT TGTCCGGCAT CGGGCCGCGA AAGGTGCTCG AGGATGCCGG CGTGCAAGTC
AGGCACGTGC TGCCGGTGGG CGAGAACTTC CACGATCACA TGCACATGTC GGTCAATGCG
ACGATCCGCA CGCCGGTGTC GCTCTACGGT CAGGACAAGG GATGGCGCGC GCTGAAGCAC
GGCATCCAGT GGAAGTGGTT CCGCTCGGGC ATCCTGACGT CGCCGGTGCT CGAAGGGTTC
GCGTTCGTCG ATACCTGCGG GCAGGGGCAG CCGGACGTCC AGTTCCACTT CCTGCCGACG
ATCGACTCGT TCGACGATCC GATCGGCGTG ACGGCGGGGC GCACGCACGG CATCACGATC
AAGACCGGCC ATCTGCAACC GTATTCGCGC GGCCGCGTGA CGATCCGATC GTCGAACCCG
CAGGAGCTGC CGCGCATCGA CGGCCGCTAT CTGGCCGACC GCCGCGACGT CGACGGCCAG
ATCCGGGCGG CGAAGCTCGC GCTGAAAATC CTGCGCCAGC CGGCGCTCGC GGAGCATGTC
GACGAGATCT TCTCGCCGGA CTGCCCGCCC GACGACGACG CGGCGATCGA GGACTGGGTG
CGCGGCGCGG CGAAGACGGT CTATCACCCT GTCGGCACCT GTCGGATGGG CACGGATGCG
GCGTCGTCCG TCGTCGATCC GCAACTGCGC GTGCACGGTA TCGCGGGGCT GCGCGTGGCC
GACAGCTCGA CGATGCCGAG CATCCCGAGC GGCAACACGA ACGCGCCGAC CATCGCACTC
GCCGAAAAGG CGTCGGACCT GATCGCCAAC GCGGCCTGA
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| Protein sequence | MSDRTFDYIV IGAGSAGCTI ATHLVERGLG TVLLLEAGGH DKDLFIHMPG GLAKAIPRYT
WPYAAEPSDD VKGRSIAVPQ GRVLGGSSSV NGMLYVRGHR NDYDRWETEF GCKGWGADDM
LRYFAKAENN ESLTAPYHGN NGHLQVTEIR YRHPLSQAFV RAGQQMGLDY LVDYNGERQQ
GVGFYQATIF NGERGSTAAT YLSAIRNRPE LSLEVDALVE RVEIEGGRAT GVTYRQGNRR
VTARARAEII VSAGAIGSPK ILQLSGIGPR KVLEDAGVQV RHVLPVGENF HDHMHMSVNA
TIRTPVSLYG QDKGWRALKH GIQWKWFRSG ILTSPVLEGF AFVDTCGQGQ PDVQFHFLPT
IDSFDDPIGV TAGRTHGITI KTGHLQPYSR GRVTIRSSNP QELPRIDGRY LADRRDVDGQ
IRAAKLALKI LRQPALAEHV DEIFSPDCPP DDDAAIEDWV RGAAKTVYHP VGTCRMGTDA
ASSVVDPQLR VHGIAGLRVA DSSTMPSIPS GNTNAPTIAL AEKASDLIAN AA
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