| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4900 |
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| Symbol | |
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| ID | 4313791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1902661 |
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| End bp | 1903845 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638152743 |
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| Product | cytosine deaminase |
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| Protein accession | YP_776783 |
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| Protein GI | 115359645 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.375518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC TGCTGATCCG CAACGTCCGC ACGCATGCCG ACGAAGCGCT CGACATCCTG
ATCGAAGGCG AGCGCATCGC GCGTGTCGGC CCGTCGCTCG ACGCGCCCGC GGGCTGTGCG
ATCGAGGACG GCGCGCTCGC GCTTGCGCTG CCCGGCCTCG TCGAAGGCCA CACGCATCTC
GACAAGACCC ACTGGGGCAT GCCGTGGTAT CGCAACGCGG TGGGGCCGCG CCTCGTCGAC
CGCATCGAGA ACGAGCGCCA CTACCGCGCG ACGAGCGGCC ACGATGCGGG CGCCGCGTCG
CTCGCGCTGT CGCGCGCGTT CCTCGCGGCC GGCACGACGC GCATCCGCAC GCACGTCGAC
GTCGATACCG ACGCCGGGCT GCGGCATCTG CACGGCGTGC TCGCGACGCG CGAGACGTTG
CGCGGCCAGG TGGACATCCA GATCGTCGCG TTTCCGCAGT CGGGCGTGCT CAAGCGGCCC
GGCACCGCCG CGCTGCTGTC CGACGCGCTC GGCGCGGGCG CCGACCTGCT CGGCGGCCTC
GACCCGTGCG CGATCGAAGG CGATCCGGTC GAAGCGGTGG ACGTGCTGTT CGGCATCGCC
GAGCGCCACG GCCGCGGGCT CGACCTGCAC CTGCACGAGC GCGGGTCGAT GGGCGCGTAC
TCGCTCGACC TGATCCTGCA GCGCACGGCC GCGCTCGGCA TGCAGGGCAA GGTCACGATC
AGCCATGGCT TCTGCCTCGG CGACGTTGCC GAACGCGAGC GCGACGCGCT GCTCGCGCGG
ATGGCCGAAC TCGGCGTCGC GATCGTCACG ACCGCGCCGG CCGCGGTGCC GGTGCCGTCG
GTCGTCGCGT GCCGCGCGGC CGGCGTGACC GTCATCGGCG GCAACGACGG CGTGCGCGAT
ACGTGGACGC CGTACGGTTC GCCCGACATG CTGGAACGCG CGATGCTGAT CGGCATGCGC
AACGATTTCC GCGGCGACGA CGCGCTCGAA GTCGCACTCG ACTGCGTCAC GCACAGCGCA
GCGCGCGGTT GCGGCTTCGC CGACTACGGG CTGGAGGCCG GCAAGCGTGC GGATGTCGTG
CTCGTCGATG CGCTGACGTT CGCCGAGGCC GTCGTCGCGC GGCCGACGCG CCGGCTCGTC
GTGTCGTCGG GAAGGATCGT CGCGCGCGAC GGCGTGCTGG TCTGA
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| Protein sequence | MTNLLIRNVR THADEALDIL IEGERIARVG PSLDAPAGCA IEDGALALAL PGLVEGHTHL
DKTHWGMPWY RNAVGPRLVD RIENERHYRA TSGHDAGAAS LALSRAFLAA GTTRIRTHVD
VDTDAGLRHL HGVLATRETL RGQVDIQIVA FPQSGVLKRP GTAALLSDAL GAGADLLGGL
DPCAIEGDPV EAVDVLFGIA ERHGRGLDLH LHERGSMGAY SLDLILQRTA ALGMQGKVTI
SHGFCLGDVA ERERDALLAR MAELGVAIVT TAPAAVPVPS VVACRAAGVT VIGGNDGVRD
TWTPYGSPDM LERAMLIGMR NDFRGDDALE VALDCVTHSA ARGCGFADYG LEAGKRADVV
LVDALTFAEA VVARPTRRLV VSSGRIVARD GVLV
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