| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4861 |
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| Symbol | |
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| ID | 4313752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1863616 |
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| End bp | 1865052 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152704 |
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| Product | outer membrane porin |
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| Protein accession | YP_776744 |
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| Protein GI | 115359606 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.054091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTTG CATGGGGCTT GCCGGCACTC GCGGGCGTGT CGCTGACCGG CGTCGCGCAC
GCCGACGACG CGGCCCCCGC ACCGCTGACG GTCGCGCAGG CCGCGCCGGC GGCCGGCGCG
AGCTCGACCG TTGCGCAGGC AACGACCCCG AACGCCGTGA TCAACGCCGA AGCGACGCAG
GCCGTCACGC CGCCGGACGA GCCGTCGGCC CAGTCGAAGT CGAAGGGCTT CATTGCCGAC
AGCCATCTCG ACTTCCTGTT CCGCAACTAT TCCGACGTGC TCGACAGCAA GGGCGGGCCG
CACCGCCACG CGTGGGTCCA GGGCGCGATG GCGAACTTCG AGTCGGGCTT TACGACGGGC
TTGATCGGTA TCGGTTTCGA CGCGTCGCTG TATGCGGCGC TGAAGCTCGA CGGCGGCCAG
GGCGCCGGCA GCATGGTGCA CATCGCGAAG GGCGGCGGTG GCGGCAACCA GCTCGCGTGG
GCCTACCCGG GCATCTACGA CATCAAGGCG CGCATTTCGA ACACGGTGGT CAAGTACGGT
CTGCAAGCCG TCGACAACCC GTTCATGGAG CAGCACGACA ACCGCGCGCT GCCGCCGACG
TTCCTCGGCG CGACGATCGT CAGCAACGAA TTCAAGAACG TGATGCTCGA GGCCGGCAGC
TTCACGAAGA CCGACGCACG CGGTCACACG ACGCTCACCA ACCTCACCAC GCAATACGGC
GGCACGCGCA TCAACCGCCT GACGTATGTC GGCGGCACGT GGGACTACTC GCCAAACGGC
GAAGTCGCGC TGTACGCGAA CCAGGCCGAC GACGTGTGGC ACCAGTACTA CGCGTCGGTG
AAGCACAGCA TCGGCAGCAC GCAGACGATC AAGTGGACGG GCTTCGGCAA CGTCTACTCG
ACGCACGACA CCGGCGACGC GCTGCAGGGC AAGATCGACA ACAACGCATA CAGCCTGTCG
CTGGCCGCGC AGCACGGCCC GCACGAGCTG CTGCTCGGCT TCCAGCAGGT GCTCGGCGAT
CAGTTCTTCG ACTACCTGAA CGAAACCAAC GGCATCTTCC TGACCAACTC GATGGACGTC
GACTACAACG CGCCGCACGA AAAGTCGCTG CAGCTGCGTT ACACGTTCTA CGGCAAGGAA
GCAGGCCTGC CGGGTTTCAA GGCGATGGTG TGGGGCGTGA CGGGCTGGGG GGCGGACGGC
AGCGCGGGCG CGGCGAACGA TCCGAGCAAG TCGAGCATCT ACTGGAGCAA CGGCGCGCCG
GTGCAGGGCC GTCACCACGA GTTCGGCTTC ATCCCGTCGT ACACGTTCCA GAGCGGCAAG
CTGAAGGACA CGAAGGTCAC GTTCATCGCG ATGTGGCACA ACGGTTCCGC GCACTACTCG
GACGCGACGA ACACCGAGTA TCGCCTGGTC GTGAACCTGC CGCTGCACGC GTTCTGA
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| Protein sequence | MLLAWGLPAL AGVSLTGVAH ADDAAPAPLT VAQAAPAAGA SSTVAQATTP NAVINAEATQ
AVTPPDEPSA QSKSKGFIAD SHLDFLFRNY SDVLDSKGGP HRHAWVQGAM ANFESGFTTG
LIGIGFDASL YAALKLDGGQ GAGSMVHIAK GGGGGNQLAW AYPGIYDIKA RISNTVVKYG
LQAVDNPFME QHDNRALPPT FLGATIVSNE FKNVMLEAGS FTKTDARGHT TLTNLTTQYG
GTRINRLTYV GGTWDYSPNG EVALYANQAD DVWHQYYASV KHSIGSTQTI KWTGFGNVYS
THDTGDALQG KIDNNAYSLS LAAQHGPHEL LLGFQQVLGD QFFDYLNETN GIFLTNSMDV
DYNAPHEKSL QLRYTFYGKE AGLPGFKAMV WGVTGWGADG SAGAANDPSK SSIYWSNGAP
VQGRHHEFGF IPSYTFQSGK LKDTKVTFIA MWHNGSAHYS DATNTEYRLV VNLPLHAF
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