| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4853 |
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| Symbol | |
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| ID | 4313744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1852499 |
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| End bp | 1854040 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152696 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_776736 |
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| Protein GI | 115359598 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG ACTGGGTCCG CCTGCCCGTC AATTACGGCG ACGTGCTGCG GCGCGCCGCC
GAGTCGCTGT TTCGTACGTT CGAGGATTCG AGCGCGGGCA CGGTGGTCGT CGATCGCGAC
GCGCGCGTCG TGTGGATGAA CGAGCGTTAT GCGGCGCGTT TTGGATTCGC CGATCCGCAG
CAGGCGGTCG GCCTCGACTG CGAGGCGGTG ATTCCGAACA GCCTGATGCG CGAGGTCGTG
TCGAGCGGAC AGCCGATCCT GCTCGACATC ATGGAGACGG GCCGCGAGCC GCTCGTCGTC
ACGCGCCTGC CGTTGAAGAA CGAGGCGGGC GAGACGGTCG GCGCGATCGG CTTCGCGCTG
TTCGACCAGT TGAAGACGCT CACGCCGATC TTTTCCCGCT ACGCGCAGCT TCAGCAACAG
CTGATCGCGA CGCAGCGTTC GCTCGCACAG GCGCGCCGAG CGAAATACAC GTTTGCGAGC
TTCGTCGGCA CGAGCGCCGC GAGCCTCGAA ACCAAGCGGC AGGCGCGGCG CGCGGCGCAG
GTCGATTCGC CGGTGCTGCT GCTCGGCGAG ACGGGCACCG GCAAGGAACT GCTCGCGCAT
GCGATCCACG CGGCGTCGGC GCGCGCGCTC CAGCCGCTCG TGACCGTCAA CGTCGCGGCG
ATTCCCGACA CGCTGCTCGA AACCGAATTC TTCGGCGCGG CGCCGGGTGC GTATACCGGT
GCCGATCGCA AGGGGCGCGT CGGCAAGTTC GAGCTGGCCG ATCGCGGCAC GCTGTTTCTC
GACGAGATCG GCGACATGCC GCTGCCGCTG CAGGGCAAGC TGCTGCGCGT ATTGCAGGAC
AAGGAGTTCG AGCCGGTCGG CTCGAACCGG ATCGTGCGCG CGGATGTGCG GATCATCGCC
GCGACGTCGG CCGACCTGCC CGCGCTGGTC GAGGCCGGCC GCTTTCGCGC GGATCTCTAT
TACCGGCTCA ACGTGTTGAC GATTCACGCG CCGCCGCTGC GCGAGCGCGC GTCCGACATC
GCGGCGCTCG TCTACGCGAC GCTGGAAGAA CTGGCCGCGC AGCACGGCCG CGCCGCACAC
TGCGAACTGA CCGACGATGC GCTGCTGGTG CTGTGCGCGT ACCCGTGGCC GGGCAATGTG
CGCGAGCTGC GCAACACGCT CGAGCGTGCG CTGATGCTGT CGGATCGCTC GGTGATCGAC
GCGCGTGCGC TCGCGCCGTT CCTCGGGCCA GTGCGTGTGG CGCCCGACAG CGTGCCGGCG
GGCGGGCGGG TCGCGCCGTC GTCGGCCGGC CGCGATGCGG GCGACGCATC GGTTGCGCCT
GGTGCACCTG GTGCGCCGGT CGTTTCGTAT ACCGATGCAT TGGCCGCGTG GGAGCGCCAG
TTCCTGATCG ATGCGCTGGT CGCTTGCGAC GGCAAGGTGG TGGAAGCGGC CGCGCGGATC
GGCATCGGTC GGGCGACGCT CTACAAGAAA CTGGCGGCGC TGGGAATCGA CCGTTGGCAA
GCGGCGGCGG ATGCGCGCGG ACATGATGAG CGGCACCGGT GA
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| Protein sequence | MMNDWVRLPV NYGDVLRRAA ESLFRTFEDS SAGTVVVDRD ARVVWMNERY AARFGFADPQ
QAVGLDCEAV IPNSLMREVV SSGQPILLDI METGREPLVV TRLPLKNEAG ETVGAIGFAL
FDQLKTLTPI FSRYAQLQQQ LIATQRSLAQ ARRAKYTFAS FVGTSAASLE TKRQARRAAQ
VDSPVLLLGE TGTGKELLAH AIHAASARAL QPLVTVNVAA IPDTLLETEF FGAAPGAYTG
ADRKGRVGKF ELADRGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPVGSNR IVRADVRIIA
ATSADLPALV EAGRFRADLY YRLNVLTIHA PPLRERASDI AALVYATLEE LAAQHGRAAH
CELTDDALLV LCAYPWPGNV RELRNTLERA LMLSDRSVID ARALAPFLGP VRVAPDSVPA
GGRVAPSSAG RDAGDASVAP GAPGAPVVSY TDALAAWERQ FLIDALVACD GKVVEAAARI
GIGRATLYKK LAALGIDRWQ AAADARGHDE RHR
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