Gene Bamb_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4653 
Symbol 
ID4313545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1628527 
End bp1629318 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID638152492 
Producthypothetical protein 
Protein accessionYP_776537 
Protein GI115359399 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000611721 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.312324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAC GACTCCGTAT CCCCATCGCT GACGAACGAG GTACACCCGT GAACATTGCC 
GATCTGCAAC CCGCCCTCGC ATCTGTCGAC CTCGTACAAC GCGTGAGCGC AGTCGACTGG
ACCGCCGTCG GTACCGAACT CGATCGCTAT GGGTGCGCTC GCGTACCGGG CCTTCTCTGC
ACCGACGAAT GCACGGCGCT GGCGTCGCTC TATTCGCGCG ATGCGCTTTA CCGTTCGCGC
GTCGTCATGG CGCGGCATGG CTTCGGCCGC GGCGAATATC GGTATTTCGC TTATCCGCTG
CCGGCGGTCG TCGACACGTT GCGAACCGCG ATCTACCCGC ATCTCGCGCC GATCGCGAAT
CGCTGGAACC AGGCGCTCGG GATCGACGTC CGCTACCCGG CCGACCACGC GGCATTCCTC
GAGCGCTGCC ACGCGGCGGG ACAGACGCGA CCGACGCCGC TGATCCTGCA GTACGGTCCG
GACGACTACA ACTGCCTCCA TCAGGACCTG TATGGCGAGC ACGTCTTTCC GCTGCAGGTC
GCGATCCTGC TGTCGGCGCC GGGCCGCGAT TTCACGGGTG GGGAGTTCGT GCTGACGGAA
CAGCGGCCGC GGATGCAGTC GCGTGCGGAA GTGGTGCCGC TGACACAAGG CGACGCTGTG
ATCTTTGCCG TGCACGGCAG GCCCGTACAG GGAACGCGCG GCGTCTATCG CGTCAACCTG
CGTCACGGCG TGAGCCGTAT CCGGACCGGG CACCGCCATA CGGTCGGCAT CATCTTTCAT
GATGCTCAGT AG
 
Protein sequence
MPARLRIPIA DERGTPVNIA DLQPALASVD LVQRVSAVDW TAVGTELDRY GCARVPGLLC 
TDECTALASL YSRDALYRSR VVMARHGFGR GEYRYFAYPL PAVVDTLRTA IYPHLAPIAN
RWNQALGIDV RYPADHAAFL ERCHAAGQTR PTPLILQYGP DDYNCLHQDL YGEHVFPLQV
AILLSAPGRD FTGGEFVLTE QRPRMQSRAE VVPLTQGDAV IFAVHGRPVQ GTRGVYRVNL
RHGVSRIRTG HRHTVGIIFH DAQ