| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4597 |
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| Symbol | |
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| ID | 4313489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1560143 |
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| End bp | 1562320 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152436 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_776481 |
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| Protein GI | 115359343 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.832775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCC GTCGAACGCC CCGCCGCGCG CGGACCTTGC GCCCGTGGCG CGCGAGCCTG
CCTGCCCTGA TCACCCTTTG CGTCGCCAGC GGCGCGCATG CCGACGCGGA GCCCGCCCAG
GCGGCATCCG CGCCCGCACC GGCATCCGTA TCGCCGCCCG AACGCGAACT GCCGATGATC
AGCGTCAATG CATCGGCGGC CGCCGATCCG ACCGTCGGCT ACCAGCCGCG CACCAGCAGC
ATCGCCGGCG GCGACGCGCG CCCCATCAAG GAGATCCCGC AAGCGGTCGC CGTGGTCAGC
AGCAGCGTGA TGCAGGACCA GCAGGCGCGC TCGCTCGACG ACGTGCTCGG CAACATCAGC
GGCATCACGC AGACCAACAC GCTCGGCGGC ACGCGCGACG CGTTCATCAA GCGCGGTTTC
GGTTCGAACA ACGACGGCTC CGTGCTCGTC GACGGTGTCC GCACGCCGGT GCTGCACAGC
TATCTCGCGA CGATCGATCG CGTCGAAGTG CTAAAGGGCC CGGCTTCGCT GCTGTACGGG
ATGCAGGACC CGGGCGGCGT GATCAACCTC ATCACGCGCA AGCCGGAGGA CACGTTCGGC
GGCTCGATCT CCGCATCACG CACGAGCCAC GGCGGCAGCA GCGCGCAGTT CGACCTGACG
GGCCCGCTGG GCAAACCCGG GCAGGTCGCG GGCGGCACGC TCGCGTTCCG GCTCACCGGC
GAATACGACA CGAGCCGCTA CTGGCGCAGC TTCGGCCGCG AACGCAACGC GCTGATCGCG
CCCGCGCTGT CGTGGCACGA CGCGAACACG TCGATCGACG TCAGCTACCA GTACGTCGAC
TACACGATGC CGTTCGATCG CGGCACCGTG CTCGTGAACG GCCGCCCCGA CGACGCGCTG
CGCTATCGCC GCTACGACGA ACCGTGGGCG CAAAGCAGCG GGATCCAGGA AACGCTGCGG
GCGCGCGTCG AGCACCGCTT CTCCGACGCG TGGCGCGTAC GCGCGACGTA CGGCTGGGGC
CGCGACCGCT ACGATCAGTA CATCGCCCGC GGCACCGCCT TCAACAGCGC GACCGGCGCG
ATGACGCGCA CGGCCGACGC GAACCTCGGA CGCAACGACT CCGACCAGAT CGCGACGCTC
GGCCTGCTCG GCAACCTGAC GCTCGCCGGG ATGAATCACG CGCTCTACAT CGGTGGCGAA
TACGAACGGC AGCGCAGCTT CCGCGGCGAC ACGATCCGCG GCAAGGCGAT CAAGGGCTTC
GATCTCTACG ATCCCGTCTA CGGCCTGCTC GCGCCGGGCG GCACGCCGAA CGTGAAGCAG
AGCGATTCGC TGTCAAAGGT CCACACGTAT TCGATGATCG TGCAGGATTC CGTGAAGATC
ACCGACCGGC TCACCGCGGT CGGCGGGCTG CGCTGGGAAG ACTGGCAGCA GGAATCGGGG
ATGGGGCGGC CGTTCGCGTT CGCCGACCGC TCGCACGGCA ACGTGTGGCT GCCGCAGTTC
GGGCTCGCGT ATGCGCTCAC GCCGTCGCTG ACCGCGTATG CGAACGTGAG CCGCTCGTTC
AAGGCGAACG TCGCGTCGAA TGTCACGTCA CCGCTCGCGC CGGAATTCGG CCGCGTGCTG
GAAGCCGGCC TGAAGTTCGA CCTGAAGCCC GGCATCACCG GCACGCTCGC GGCCTACCAG
ATCGACAAGC GCAACGTCGC GGTAACAGTA GGCGACATCA CGTCGACGAT CGGCACCGCG
CGCTCGCGCG GGATCGAACT CGACGTCGCG GGGCAGATCA CGCGGCACCT GAGCCTGATC
GGCAGCTACG CGTACACGAA CGCGAACGAT CGCGACAGCA ACACGTCGCT CGTCAACGTC
GCGCGCCACA CCGGCAGCCT GTTCGCGGTG TATGACACGG CGATCGCCAA CCTGCCCGGC
CGCTGGCGCT TCGGCGGCGG CGCGCGGCTC GTCGGCGCAC GGCCCGGCGA CACCGCGAAC
AGCTTCACGC TGCCCGGCTA CGTGACCGTC GATGCGTTCG CGGCCTACGA GACCACGATC
GGCAAGTTCC CGACGCGCAT CCAGCTCAAC GTGAAGAACC TGCTCGACAA GACCTACTAT
CCGTCGAGCA ACAGCAACCT GATCGTCGCG GTCGGCGAGC CGCGGCTCGT CACGCTGACG
ACGACGGTGT CGTTCTGA
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| Protein sequence | MPSRRTPRRA RTLRPWRASL PALITLCVAS GAHADAEPAQ AASAPAPASV SPPERELPMI
SVNASAAADP TVGYQPRTSS IAGGDARPIK EIPQAVAVVS SSVMQDQQAR SLDDVLGNIS
GITQTNTLGG TRDAFIKRGF GSNNDGSVLV DGVRTPVLHS YLATIDRVEV LKGPASLLYG
MQDPGGVINL ITRKPEDTFG GSISASRTSH GGSSAQFDLT GPLGKPGQVA GGTLAFRLTG
EYDTSRYWRS FGRERNALIA PALSWHDANT SIDVSYQYVD YTMPFDRGTV LVNGRPDDAL
RYRRYDEPWA QSSGIQETLR ARVEHRFSDA WRVRATYGWG RDRYDQYIAR GTAFNSATGA
MTRTADANLG RNDSDQIATL GLLGNLTLAG MNHALYIGGE YERQRSFRGD TIRGKAIKGF
DLYDPVYGLL APGGTPNVKQ SDSLSKVHTY SMIVQDSVKI TDRLTAVGGL RWEDWQQESG
MGRPFAFADR SHGNVWLPQF GLAYALTPSL TAYANVSRSF KANVASNVTS PLAPEFGRVL
EAGLKFDLKP GITGTLAAYQ IDKRNVAVTV GDITSTIGTA RSRGIELDVA GQITRHLSLI
GSYAYTNAND RDSNTSLVNV ARHTGSLFAV YDTAIANLPG RWRFGGGARL VGARPGDTAN
SFTLPGYVTV DAFAAYETTI GKFPTRIQLN VKNLLDKTYY PSSNSNLIVA VGEPRLVTLT
TTVSF
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