Gene Bamb_4499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4499 
Symbol 
ID4313391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1448104 
End bp1449516 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content65% 
IMG OID638152338 
Productcoagulation factor 5/8 type domain-containing protein 
Protein accessionYP_776383 
Protein GI115359245 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGA AGTTCCTCGT CGCGGGCCTC GTGGCCGGCA TCGCCCTCGA CCTGTTCAGC 
GGCGCCGCCG CGGCCGCCTG CGTCAACAAT CCGCCGGCTC AGTCCAATGC GTCGTTTCCC
GGTGCACTGA CCGGCAAGCT CGTCTATCAC AGCTACGTTA AGTACGGCGA CGGCACGAGC
CAACTGTTTT TGTACGACTT TTCCGCCCGC ACGCTCACGC AATTGAGCAA GAGCGGCTGG
GGCATCACCG ATCCGATGAA CGGCGTGTTC AGCCCCGACG GCAAGTGGCT CGCGTTCATG
GGGATCAGCA ATGGCGCGTG GAACGTGTTC ATGCTGCAGC TCGGCGCCGG CACGCCGCCC
GTCAACCTGA CGAACAGCAG CGGCGCGACC CGCAACGAGG ATCCGAAGTT CGCAGCCGAC
GGCAAGACGC TCGTGTTCAA GCAGAACGGC GACGTGAAGC AGGGCACGCT GTCGTACACG
AGCGCGGGCC CAGTGTTCAC GTCGGTCGTG AGCCTGACGA ACGCGCCGGC CGGCAGCGAA
TACTCGATGC CGTTCCTCGC GCCGGACGCG AGCGCCGTGT ACTACGCGAC GGGCACCGGC
TCGAACATGG GGCTGATGAA GCGCACGATC GCGACCGGCG CCACGGCGGT ATTCGATCAT
CCGGCCGGGC TGCAGACCTA CTACCCGATC GTGCGCCGCG ATGGCATGGT GTTCTACGCA
CGCTGGAAGG ACAGCGGCGG CGCGGACCAG ATCTACGCGA AGACCGCCGA TCCGGCGTCG
ACGCCGAGCG CGCTGCCGAT CAACGACTGC ATGAGCAACA ACTCGGACCC GGCACCGGTG
AGCGGCACGA ACTACGTGTT CTTCTCGTCG ACGACGGCGG GCGGCTACCA GCTCTACGTG
GGTGACGTGA CGACCGGCCA GCGCTGGAGC CTGTCGCAAT TCGGCGTGAA CGCGGATACG
ACGAAGGCGA AGCTCGGCGC GAGCTACTAC GGCGGCCCGG CGGCCGCGCA ACCGACGCTG
CTGTCGCAAG GACGTCCGGC CGCTGCATCG GCGAGCTACA ACGCGTCGCT GACGCCGGAC
AAGGCATTCG ACGGCAACAC GACGAGCACG CGCTGGGATT CGCCGGAAGG CGCGGGCGTC
GGTACGGAAT GGATCTCCGT CGATCTCGGT GCGGTGAAGA AGGTCAGCAG CGTCGATCTC
TACTGGGATG CGGGTGCGCT CGTCTACCAG ATCCAGACGT CGAACGACAA CGCGAACTGG
ACGACGGTCT ATTCGACGAA CAACGGCGTG TCGTACGGTC ACGTTACGCT GCCGAACCTC
AACGCGCAGG GACGCTACGT GCGGATGCTC GGTACGAAGC GGGCAACGCA GTGGGGTTAT
TCGCTCGATG AAATGCAGGT GTGGGGATCG TAA
 
Protein sequence
MKSKFLVAGL VAGIALDLFS GAAAAACVNN PPAQSNASFP GALTGKLVYH SYVKYGDGTS 
QLFLYDFSAR TLTQLSKSGW GITDPMNGVF SPDGKWLAFM GISNGAWNVF MLQLGAGTPP
VNLTNSSGAT RNEDPKFAAD GKTLVFKQNG DVKQGTLSYT SAGPVFTSVV SLTNAPAGSE
YSMPFLAPDA SAVYYATGTG SNMGLMKRTI ATGATAVFDH PAGLQTYYPI VRRDGMVFYA
RWKDSGGADQ IYAKTADPAS TPSALPINDC MSNNSDPAPV SGTNYVFFSS TTAGGYQLYV
GDVTTGQRWS LSQFGVNADT TKAKLGASYY GGPAAAQPTL LSQGRPAAAS ASYNASLTPD
KAFDGNTTST RWDSPEGAGV GTEWISVDLG AVKKVSSVDL YWDAGALVYQ IQTSNDNANW
TTVYSTNNGV SYGHVTLPNL NAQGRYVRML GTKRATQWGY SLDEMQVWGS