| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4455 |
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| Symbol | |
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| ID | 4313347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1393607 |
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| End bp | 1394803 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152294 |
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| Product | gamma-butyrobetaine dioxygenase |
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| Protein accession | YP_776339 |
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| Protein GI | 115359201 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | [TIGR02409] gamma-butyrobetaine hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.63153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG CGCAACACCG TATCGAGGAC TGGCGGACTT TTTCCGGCGA CGCGGCCATC
GCGGCGGCGA CGATCGGCGA TGGCGCGGTG GACGTCGAGT GGAGCGACAC GCGACGATCG
CCGTTTCACT TCGACTGGTT GCGCGACAAC TGCGCGTGTT CCGCGTGCGT GCATGCGCTC
ACGCGCGAAC AGGTGTTCGA GATCGCCGAC GCGCGCGAGG ATCTGTCGGC CCTCGTCGTG
CATGTCGAAA CCGACGGCGC GCTGCACGTC GAGTGGAACG ACGGGCATCG CAGTACCTGG
TCGCCGGGAT GGTTGCGCGC GCATGCATAC GACGATGCGT CGCGCGCCGA GCGTCAGGCC
GCGCACGGGC GGCACGTGTG GACCGGCGAC GACGCGACGG CGATCGGCGT GTTCGCGTGG
CGTGACGTGA TGGAGGACGA CGGCGCGTTG CTCGCGTGGC TCGCCGCGTT GCAGCGCACG
GGGCTGACGC TCGTCGAGGG TGTGCCGGCC GAACGCGGCC GGGTCGATCA GATCGCGCGT
CGTATCGGCC TGATTCGCGA AAGCAATTTC GGCGTGCTGT TCGACGTCGA ATCGAAGCCG
CGACCGGACA GCAACGCTTA TACGTCGCTC AACCTGCCGC CGCACACCGA CCTGCCGACG
CGTGAATTGC AGCCGGGCGT GCAGTTCCTG CACTGCCTCG CGAACGACGC AACGGGCGGA
GACAGCGTCT TCCTCGACGG CTTCGCGCTC GCGGATGCAT TGCGGCGCGA ATATCCGGCT
GATTTCCGGC ACCTTGCGTC GACACCGTTC GAGTTCTGGA ACAAGAGTGC TGACAGTGAC
TACCGCTGTT CGGCGCCGGT GATCGGGCTC GATGCGCGCG GCAACGTGAC CGAGGTGCGC
GTCGCGAACT TCCTGCGCGG GCCGCTCGAT GCGCCGGCCG ATGCGGTGGC GGCTGTCTAT
CGTGCATACC GGCGTTTTCT CGCGCTCGCG CGCGAGCCGC GCTTTCGCGT GCAGCGACGG
CTGCGGGCCG GCGACATGTG GGCGTTCGAC AACCGGCGCG TGCTGCACGC GCGCACCGAG
TTCGATCCGT CGACGGGCCG CCGCCATCTG CAGGGGTGTT ACGTCGATCG CGACGAACTG
CTGTCGCGGT GGCGCGTGCT GTCGCGCACG GTGCCTGCGG CAGCCGCGGC GCGCTGA
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| Protein sequence | MQAAQHRIED WRTFSGDAAI AAATIGDGAV DVEWSDTRRS PFHFDWLRDN CACSACVHAL
TREQVFEIAD AREDLSALVV HVETDGALHV EWNDGHRSTW SPGWLRAHAY DDASRAERQA
AHGRHVWTGD DATAIGVFAW RDVMEDDGAL LAWLAALQRT GLTLVEGVPA ERGRVDQIAR
RIGLIRESNF GVLFDVESKP RPDSNAYTSL NLPPHTDLPT RELQPGVQFL HCLANDATGG
DSVFLDGFAL ADALRREYPA DFRHLASTPF EFWNKSADSD YRCSAPVIGL DARGNVTEVR
VANFLRGPLD APADAVAAVY RAYRRFLALA REPRFRVQRR LRAGDMWAFD NRRVLHARTE
FDPSTGRRHL QGCYVDRDEL LSRWRVLSRT VPAAAAAR
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