| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4419 |
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| Symbol | |
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| ID | 4313313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1355748 |
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| End bp | 1356497 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152260 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776305 |
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| Protein GI | 115359167 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.912648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00281141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACCG TATTGATCAC CGGCTGTTCC TCCGGCTTCG GCCTCGAGAT CGCCCGTCAT
TTCCTGGCCC GCGACTGGCA GGTCGTCGCG ACGATGCGCA CGCCGCGCGA GGACGTCCTG
CCGCCGTCGG AGCACCTGCG CGTGCTGGCG CTCGATGTCA CGAACCCCGA CAGCATCCGC
GCGGCGATCG ACGCCGCCGG CCCGATCGAC GTACTCGTCA ACAATGCGGG TTTCGGCGCG
GCCGCGCCGG CCGAACTGAT GCCGCTCGAC ACCGTGCGCG CGCTGTTCGA GACCAACACG
ATCGGCACGA TCGCGGTGAC GGAAGCCGTG CTGCCGCAGT TGCGCCGGCG CGGGGCCGGC
GTCGTCGTGA ACGTTACGTC GAGCGTCACG CTGAAGGTGC TGCCGCTGGT CGCCGCCTAT
CGCGCCAGCA AGGCGGCAGT TAATGCGTAC ACCGAATCGA TGGCACTCGA ACTCGAACCG
TTCGGCGTGC GCGCGCGTCT CGTGCTGCCG GGCCGTGCGC CGGACACGCG TTTCGCCGAT
AACGCGCGCG TGCACATGCA CGGCTTCGAG CACGAAGCTT ATGCGGAGTT TGCGGCGGCG
GCCTTCAGGC GCATGGTCGA CGAATCCGCG CCGATTACCC ATGCGCGGGA CGTCGCCGAA
GCCGTGTGGC GGGCGGCGAC CGATCCGTCG TGCCCGATGC GCATCCCGGC CGGCGCCGAT
GCCGAAGCGT GGGCGGCCGA AGCGCATTGA
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| Protein sequence | MKTVLITGCS SGFGLEIARH FLARDWQVVA TMRTPREDVL PPSEHLRVLA LDVTNPDSIR
AAIDAAGPID VLVNNAGFGA AAPAELMPLD TVRALFETNT IGTIAVTEAV LPQLRRRGAG
VVVNVTSSVT LKVLPLVAAY RASKAAVNAY TESMALELEP FGVRARLVLP GRAPDTRFAD
NARVHMHGFE HEAYAEFAAA AFRRMVDESA PITHARDVAE AVWRAATDPS CPMRIPAGAD
AEAWAAEAH
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