| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4418 |
|---|
| Symbol | |
|---|
| ID | 4313312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1354371 |
|---|
| End bp | 1355672 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638152259 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_776304 |
|---|
| Protein GI | 115359166 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0107565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA ACGACGACGC AACCTTCTGG CACAACGCCA GGCAGCACCT GATCCGCTAC
GGCGGCACGT TCGAGCCGAT GATCATCGAG CGCGCGCAAG GCAGCTTCGT CTACGACGCC
GACGGCCGCG CGATCCTCGA TTTCACGTCG GGCCAGATGA GCGCGGTGCT CGGCCACAGT
CATCCGGAGA TTGTCTCCGT GATCAGCGAA TACGCGGGCA AGCTCGATCA CCTGTTCAGC
GGGATGCTGT CGCGCCCGGT CGTCGACCTC GCGACGCGCC TCGCCGACAT CACGCCGCCC
GGGCTCGATC GCGCGCTGCT GCTGAGCACC GGCGCGGAAT CCAACGAAGC GGCGATCCGG
ATGGCGAAGC TCGTCACCGG CAAGTACGAG ATCGTCGGCT TCGCGCAGTC GTGGCACGGG
ATGACGGGCG CGGCGGCGTC CGCCACGTAC AGCGCTGGCC GCAGGGGTGT CGGCCCGGCC
GCCGTCGGCT CGTTCGCGAT CCCCGCGCCG TTCACGTACC GGCCGCGCTT CGAGCGCGGC
GGCACGTACG ACTATCTCGC CGAACTCGAC TACGCATTCG ACCTGATCGA TCGCCAGTCG
AGCGGCAACC TCGCCGCGTT CATCGCGGAG CCGATCCTCA GCTCCGGCGG CATCATCGAA
TTGCCGGAAG GCTACATGGC GGCGCTCAAG CGCAAGTGCG AGGCGCGCGG GATGCTGCTG
ATCCTCGACG AAGCGCAAAC CGGCGTCGGG CGCACCGGCA CGATGTTCGC GTGCCAGCGC
GACGGCGTGA CGCCCGACAT CCTCACGCTG TCGAAGACGC TCGGCGCGGG GCTGCCGCTC
GCGGCCGTCG TCACGTCCGC GCAAATCGAG GAGCGCGCGC ACGAACTGGG CTACCTGTTC
TATACGACGC ACGTGTCGGA TCCATTGCCG GCCGCGGTCG GCCTGCGCGT GCTCGACGTG
GTGCAGCGCG ACGGCCTCGT CCAGCGCGCG AACGTGATGG GCGACCGGCT GCGGCGCGGG
CTGCTCGACC TGATGGAGCG CTTCGACTGC ATCGGCGACG TGCGCGGACG CGGGCTGCTG
CTCGGCGTCG AGATCGTCAA GGATCGCCGG ACGAAGGAGC CCGCGGACGG GCTCGGCGCG
AAGATCACGC GCGAATGCAT GAAGCTCGGG CTCAGCATGA ACATCGTGCA GTTGCCCGGC
ATGGGCGGCG TGTTCCGGAT CGCGCCGCCG CTGACCGTCA GCGACGAAGA GATCGATCTC
GGCCTGTCGC TGCTGGAACA AGCGATCGCA CGCGCGCTGT AA
|
|---|
| Protein sequence | MSLNDDATFW HNARQHLIRY GGTFEPMIIE RAQGSFVYDA DGRAILDFTS GQMSAVLGHS
HPEIVSVISE YAGKLDHLFS GMLSRPVVDL ATRLADITPP GLDRALLLST GAESNEAAIR
MAKLVTGKYE IVGFAQSWHG MTGAAASATY SAGRRGVGPA AVGSFAIPAP FTYRPRFERG
GTYDYLAELD YAFDLIDRQS SGNLAAFIAE PILSSGGIIE LPEGYMAALK RKCEARGMLL
ILDEAQTGVG RTGTMFACQR DGVTPDILTL SKTLGAGLPL AAVVTSAQIE ERAHELGYLF
YTTHVSDPLP AAVGLRVLDV VQRDGLVQRA NVMGDRLRRG LLDLMERFDC IGDVRGRGLL
LGVEIVKDRR TKEPADGLGA KITRECMKLG LSMNIVQLPG MGGVFRIAPP LTVSDEEIDL
GLSLLEQAIA RAL
|
|---|
| |