| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4357 |
|---|
| Symbol | |
|---|
| ID | 4313251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 1283496 |
|---|
| End bp | 1284872 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638152197 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_776243 |
|---|
| Protein GI | 115359105 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000114485 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000640449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG TGCGACTCGC GATCGAGCGC TGGCGCAGCG CGTCGCTGCG GCGGCGCCTG
TTGATGTGGC TGCTGCCCGC CGCCTGCGTG ATCGGGCTGG TCGCAAGCGC GGGCACCTAC
TGGGGCGCGC TGCGCGAGCT CGACGATCTC CTCGACGACC AGATGCGCAG CATGTCGAAG
CAGATCGTCG TCGGCCCGAA CGGCGAGCTG TCGTTTCGCG ACCACGGCGA CGGCAAGCAC
GACTTCGAGG CCAGCGATCC CGACGCCGTG CTGCTGCAGG TCTGGCGCAA CGGCACTCTG
GTCTACTCGA CCGATCGCGA ATCCGCGCTG CCGCCGCCCG CGCAGACGGG CGTCGGCAGC
GTCGACGTCG GCGGCCAGCC GTGGCGCACC TATGTGACCC AACGCGGCGG CACGACGATC
CGGCTCGCGC AGGCGCGCCA TGCGCGCTGG GAAGCGATCG CGGGCATCGC GGTGCATTTG
CTGTGGCCGG TGTTCTCGAT GCTGCCGGTG CTCGCGATCG GGCTGTGGTT CGGCATCGGC
GCGGGGCTGC GGCCGCTGCG CACGATCGCA TCGGGCCTGA AGCGCAGGAA TGCGAACAAT
CTCGAACCGG TCGACGTCGC GTCGATGCCG AACGAGGTGC GGCCGCTCGC CGAAGCGATC
AACGACCTGC TCGCGCGGCT CGACCGCTCG TTCACGCTGC AGCGCCACTT CATCGCCGAT
GCCGCGCACG AGCTGCGCAC GCCGATCATG GGGCTGTCGA TCCAGTCGCA ATTGCTGCGG
CGCGCGGCGA CCTCCGACGA ACGTGAACAG ATCCTCGCGC AGATCCATGC GGGCACGACA
CGCCTCGGCC ACCTCGCCGA GCAGTTGCTG ACGCTCGCGC GCCTCGAACC CGATGCGCAG
GCGAGTGCGT CGGCGTCCAC GCCCGTCGAT CTCGCCGCGC TGTGCCGCTC GGTGGTCGCC
GACCGCACGC GCGTCGCCGA TGCGCATCGG ATCGACCTCG GCGCGATCGT GTCGTCGCCG
GTGATGGCCG CCGGCAATAT CGATACGTTG CGCGTACTGC TGAACAACCT CGTCGACAAC
GCGATCCGCT ACGCGGGCGA CGGCGCACGC GTCGACGTAT CCGCGCGCGT CGACGGCGCC
ACCCCCGTGC TCGAAGTCGC CGACGACGGC CCCGGCATCC CGGAAGCCGA GCGCACGGAA
GTCTGGGAGC GCTTCTATCG CGGCGAAGGC GCGCAGGCCG TCACGGCGTC GGGCAGCGGA
CTCGGGCTGT CGATCGTCAA GCGGATCGCC GAACAGCATC GCGCGACGGT CGCGCTCGGC
ACGACGCCAG GCGGGCGCGG GCTGACCGTG ACGGTGCGCT TTCCCGTGCC GATCTGA
|
|---|
| Protein sequence | MTRVRLAIER WRSASLRRRL LMWLLPAACV IGLVASAGTY WGALRELDDL LDDQMRSMSK
QIVVGPNGEL SFRDHGDGKH DFEASDPDAV LLQVWRNGTL VYSTDRESAL PPPAQTGVGS
VDVGGQPWRT YVTQRGGTTI RLAQARHARW EAIAGIAVHL LWPVFSMLPV LAIGLWFGIG
AGLRPLRTIA SGLKRRNANN LEPVDVASMP NEVRPLAEAI NDLLARLDRS FTLQRHFIAD
AAHELRTPIM GLSIQSQLLR RAATSDEREQ ILAQIHAGTT RLGHLAEQLL TLARLEPDAQ
ASASASTPVD LAALCRSVVA DRTRVADAHR IDLGAIVSSP VMAAGNIDTL RVLLNNLVDN
AIRYAGDGAR VDVSARVDGA TPVLEVADDG PGIPEAERTE VWERFYRGEG AQAVTASGSG
LGLSIVKRIA EQHRATVALG TTPGGRGLTV TVRFPVPI
|
|---|
| |