| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4325 |
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| Symbol | |
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| ID | 4313219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1250740 |
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| End bp | 1252548 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638152165 |
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| Product | hypothetical protein |
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| Protein accession | YP_776211 |
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| Protein GI | 115359073 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0842061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATA CGTTGTCGCT CATGTCGTCC TTGCGCGACG TCGCCAGCCG AATCAATGCG
GATGCCGACG TCGACACGCT GCTGCACAGC CTGATCGACC TGGCCTGCCA TCACGGCTCC
TGGGATCTCG GCGCGATCAT GAGCGTGGAT ATCGCGCACG GCTACGCGCT GGTGATCGCG
CGGCGCGACC CGACCCTACT CAAGCGGACG CTGGCCGACC GGTGGGAGCT GGCCACCAGC
CCAGCACTGG TCGCGCTGCA GCGCAACGAG CCGGTCTATA TCCGCGACGC GCTGGAGACC
ACCGAATTCC TCGGCTACCG GCGCGAGGCG CCCGAGCGCG GCTATCGCAC CGTGCTGGTG
CTGCCGATGG CGAGTTGCGA TGCCGAGGGG CGGCCGATGG TGCTGGTGGT GTCGGCGCGC
AAGGTGGTGG ACGTGGCGCC TGAGCACCTG GCCTTCATGG AGTTGCTGGT GCACCTCGGC
GCGATCGCGA TCGAGCGCGC CCATCGCCAG CGCGCGCAGC AGGCCGCCGC CGAGCAGTTG
CGGCGCGTGC TGTCGGTGCA GGGCGCGATG CTGCAGGAGG TGCTGGTGGG CGGCTCGATG
GATACGCTGA CCGGCATGCT GGCCGACCTG CTCGACTCGC CGGTGCTGGT GATCGACTTC
TATGGTGGCG AACTGCTGGC CTCGCGCCCG CCCGTCGAAG GGCTCGACGC CGCCGCCTGG
CGCGCCCTGC TCGACGGAGA AACCGGCCGC CAGATGCGCG AGACCGTGCG CGAGGCGATT
GCGCGCCACG CCTCGCGGCG GGTGGGCTTC GTGCTGCCGG GCGGGGTGCC GCTCACCGCC
GACGTCGAGC CGCTGGCGGT GGACGGCGAC ACGGTGGGCG CGCTGCTGAG CTTCGGTGAG
CGCGCCGAGG GTGACCTGCA GGCGCTCGCG ATCGAGAGCG CGAAGTTCGC GATGAGCGTG
CAGCTGATGC GCAGCGTGAT CCGCTTTCGC GCCGAGACGC GCACCCTGAC CGAGCTGTTC
TTCGAGATCG TCGAGCGGCG ATGGCGCGAC GAGCAGGACA TCGTCGAGCG CTCGCGCCGG
CTCGGCATCG CGCTCGGCAC GCCGATGCGC CTGCTCGTGG TCGACTATCC GCACCGCGAA
GGTCCGGCGC TTGACCGATC GGCCGAGTGC CATCGCACCG TTGGTCTGAT CGCGGCGCAG
CACAAGCTCA TCTCGCATCC GGTGACGGTC GGCGGCGGCC TGGTCTGTCT GTTGCCCGAG
GACGACCAGC GGCCGCTGGC CAGCGTCAAT GCCTTCGCGC GCCAGCTGTG CGGGGCGCTC
ACCCCCCTGT TCGGCGGCGA GCCGACCCTC GTGGTCAGCG ACTGCGTGGC GGGCCTGACC
GAGCTGGCCA ACGAATGGGA CCGCTGCTGG CGGATGATCC GCGTGGCGCG CTCGTTCGGC
AAGACCGGCG CGCTGAGCGT GCCCGACCTG GGGCCCTTGC CGATGCTGAT GGGCGCGGCC
GATTCGCCCG ACGTGCGGGC TTTCATCACC GGCACCATCG GTCCGATCGT CGAATACGAC
GCCAGCCATC GCGCTTCCTA TCTCGACACG CTGGCGGTCT ACATCCGACA CGGCTGCCGC
AGCCAGGCCT GCGCCGATGC GATGGGCCTG CACGTGACCA CACTGCGCTA CCGGCTGTCG
CGCATCTCCG ACCTGTTCGG CATCGACGTG GAGACGCCCG AGCGGCGCTT CGCCGTCGAG
CTCGCGCTGC AACTGCACAA CCTGCTGGAG GGCAGCGCGC CGGTGGCCGC GGCGGAGCGC
GCGCATTAG
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| Protein sequence | MPDTLSLMSS LRDVASRINA DADVDTLLHS LIDLACHHGS WDLGAIMSVD IAHGYALVIA
RRDPTLLKRT LADRWELATS PALVALQRNE PVYIRDALET TEFLGYRREA PERGYRTVLV
LPMASCDAEG RPMVLVVSAR KVVDVAPEHL AFMELLVHLG AIAIERAHRQ RAQQAAAEQL
RRVLSVQGAM LQEVLVGGSM DTLTGMLADL LDSPVLVIDF YGGELLASRP PVEGLDAAAW
RALLDGETGR QMRETVREAI ARHASRRVGF VLPGGVPLTA DVEPLAVDGD TVGALLSFGE
RAEGDLQALA IESAKFAMSV QLMRSVIRFR AETRTLTELF FEIVERRWRD EQDIVERSRR
LGIALGTPMR LLVVDYPHRE GPALDRSAEC HRTVGLIAAQ HKLISHPVTV GGGLVCLLPE
DDQRPLASVN AFARQLCGAL TPLFGGEPTL VVSDCVAGLT ELANEWDRCW RMIRVARSFG
KTGALSVPDL GPLPMLMGAA DSPDVRAFIT GTIGPIVEYD ASHRASYLDT LAVYIRHGCR
SQACADAMGL HVTTLRYRLS RISDLFGIDV ETPERRFAVE LALQLHNLLE GSAPVAAAER
AH
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