| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4314 |
|---|
| Symbol | |
|---|
| ID | 4313208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1240643 |
|---|
| End bp | 1241170 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638152154 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_776200 |
|---|
| Protein GI | 115359062 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0419553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.259885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTG AACAGGCAGG CGCCGGGGCT GGGCGGATCA AGCTCGATCG TTATGACATC
GCGATCCTGC GCATCCTCTC GACCGAAGGG CGCATCACCA AATCGCGGCT CGCGCAGGAG
GTGAACCTGT CGATCTCGCC GGCCTGGGAG CGCGTCAAGC GGCTCGAGGC CCAGGGCCTG
ATCCGCGGCT ATCGCGCGGA AGTGGATTGG GCCGGCGCGT TCACCGGCAG CCGCGTGGTG
GTTGAGGTGA CGCTGGCTCG GCATACCGCG CAGGACATGC GTCGCTTCGA GGAGCGGGTC
GCGGCGGCGC CGGAGATCGT CGAGTGTCTG GCCACCGGCG GCGGCGTCGA CTACGTCATG
CAGGTGCTGT CGCGCGACAT CGAGCATTAC CAGCAGTTCA TCGACAGCTT GCTCGGCGCG
CAGCTCGGCA TCGAGCGTTA CTTCACCTAC GTGGTGACGA AGGTGGTCAA GACCAAGGTG
GACGGATTGC CGTCGTGGGC ATCCGACGCG AGCCTGCTGG CCCGCTGA
|
|---|
| Protein sequence | MKGEQAGAGA GRIKLDRYDI AILRILSTEG RITKSRLAQE VNLSISPAWE RVKRLEAQGL
IRGYRAEVDW AGAFTGSRVV VEVTLARHTA QDMRRFEERV AAAPEIVECL ATGGGVDYVM
QVLSRDIEHY QQFIDSLLGA QLGIERYFTY VVTKVVKTKV DGLPSWASDA SLLAR
|
|---|
| |