| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4296 |
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| Symbol | |
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| ID | 4313191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1220047 |
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| End bp | 1221084 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638152137 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_776183 |
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| Protein GI | 115359045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.458319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA ATTCGAAGAC GATTTGCGCC GCGTTGCTCG CGTCCCTGTC GATGGCAGCT
TTCGCCGATG GTCTCACGAC CGTCAACTAT GGTGGCGCGG CGGGGAATGC CCAAAAGGCG
GCGTGGGTGG ACCCGTTCGC GAAGGAAAGC GGCATAGCGA CGCATGCCAT CCAGTACACG
GGTGACATGG CCAAGGTCAA AGCCATGGTC GAAGCCAGAA ATGTCACCTG GGATGTCTTG
GAGGTGGAAG CGGCGGACGT CGGTCGCGGA TGCCAGGATG GTCTCTTCGA GAAACTCGAT
TGGCCCAGGA TCGCCAACAA GAGCGACCTG ATGGCCGGAG CTGCCACACC TTGCGCGGCC
GGCACGTTCG TGTGGTCGAC CGTGCTCGCG TACAACCCCG CGCTGACCAA GGGTGCGCCG
CAAGGCTGGA AGGATTTCTG GGACGTCAAG AAATTTCCGG GAAAGCGGGG GTTGAAGAAG
GAGGCACGTT ATAACCTGGA GTTCGCGCTG ATGGCTGACG GGGTGGCGCC GAAGGACGTC
TACACGGTGC TCGGCACGTC CGCGGGTGTC GAACGCGCGT TCAAGAAGAT GGACGAGCTC
AAACCCTACA TCCAGTGGTG GGAGGCTGGC GCGCAGCCGC CACAATTCCT GATTGCGGGT
GACGTCGCGA TGTCGACCGC ATATAACGGT CGCATCGACG CGGCAGTGCG TGAAGGAAAC
AAGAATCTCG GTATAGCGTG GGATCAGAGT ATTTACGAAC TCGATTTCTT CGTCATTCCG
AAGGGATCGA AGAACAAGGA AGCGGCCGAA AAATACATCT CGTATGTGCT CAAGCCCCAG
GCACAAGTCG CGTTCGCGCA GAAGATTCCG TATGGTCCGA CCAACAAGGC AGCGCTGAAA
ATGCTCGATG CGGCAACACA GGCAGCGCTT CCCAATTCAG CGAAGAATGG CAAAACCGCC
ATTCCCAACA GTGTCGAGTT CTGGACGGAC CACGGCGACG CACTGGAGCA GCGCTTTACG
GCTTGGGCCG CGAAGTAA
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| Protein sequence | MKSNSKTICA ALLASLSMAA FADGLTTVNY GGAAGNAQKA AWVDPFAKES GIATHAIQYT
GDMAKVKAMV EARNVTWDVL EVEAADVGRG CQDGLFEKLD WPRIANKSDL MAGAATPCAA
GTFVWSTVLA YNPALTKGAP QGWKDFWDVK KFPGKRGLKK EARYNLEFAL MADGVAPKDV
YTVLGTSAGV ERAFKKMDEL KPYIQWWEAG AQPPQFLIAG DVAMSTAYNG RIDAAVREGN
KNLGIAWDQS IYELDFFVIP KGSKNKEAAE KYISYVLKPQ AQVAFAQKIP YGPTNKAALK
MLDAATQAAL PNSAKNGKTA IPNSVEFWTD HGDALEQRFT AWAAK
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