| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4295 |
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| Symbol | |
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| ID | 4313190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1218767 |
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| End bp | 1220029 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638152136 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_776182 |
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| Protein GI | 115359044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.193876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TAACTTCTCG GCAACAGAGC TGGCATACAC GCCAGCTCAA GCGGTCGCTG
CGAGCCGTTC AGTTTCGAAA GGAGATCGTG GCGTTAGGAC TGGTGGCGCC CCTCGTTCTG
TTCATCCTGC TTGTGTTCGT GATGCCGGTC GCATCGATGA TTTCTCGATC GATCCAAAGT
CCCGAGGTGG TCGATGCATT GCCGAAGACG ACCTCCGCAT TGCGCCACTG GGATGGCAAG
TCCTCCGTTC CTGCCGAGGC TTACCGTGCG CTGGTGCTCG ACGTGGAGAG CAACGGTGGC
GACAACGATA CCGGTACCGC GGCCGGTCGG CTGAACGGGC TGAAGGATGG ATTCCGGTCG
TTGTTTTACA AGACGACCAG TGCGCTTCCT TTCACCGACA ACGATGTGGC GATTTCCGCG
CAGGATATGC AAAAGCGGCT GATCGAAGTG GACCCGCGCT GGGCCGATAC GAGCTACTGG
CAGGCGATCG CAAGCGTATC GTCCCGTTAC ACGAGCCAGT ATCTCCTTGC CACGATCGAC
TATCGTGAGG GCGCGGACGG CCGCATCGTG TCGGTCGAGA ACGGCGCGTC CGCATACCGC
GCGGTGTTCA TGCGGACCTT CGTGATCAGC GGGCTTGTGA CGCTTGCGGC GCTGGTGCTG
GGTTATCCGC TTGCCTACTG GATCTCGATT CTGCCGGCTC GAAAGGCGAA TCTCGTCATG
ATCCTGGTAC TTCTGCCGTT CTGGACGTCG ATTCTCGTGC GGATCTCGGC GTGGATCGTC
ATTCTCCAGG GGGCGGGCCT CGTCAACAAG GCGTTAATGG CGCTGCAGGT GATTTCGACG
CCCCTGTCGC TCCTGTTCAA CCGGACGGGG GTGTTGATCG CGATGACGCA CATCTTGCTG
CCGTTCATGA TCCTGCCACT CTACAGCGTG ATGAAGTCGA TTCCTTCGAG TTACACGAAA
GCGGCAATTT CCCTCGGCAG TCATCCTTTC GGGGCATTCT GGAAAGTCTA TGTGCCGCAG
ACGCTTCCCG GTGTCTGCGC GGGCGGGTTG CTGGTATTCA TTACCTCGCT GGGCTACTAC
ATCACCCCGG CGCTGCTCGG TGGCGCCGGC GACCAGATGG TCAGTTACTA CATCGCTTAT
TTCACCAACG TGGCCCTGAA CTGGGGGATG GCCTGCGCGC TCGGTGCGGT CCTTCTCCTG
GTGACGCTGG TGCTCTTCGC GCTCTATCGA AGGATCGTCG GTTCGGAAAT CAAGGTGGCC
TAG
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| Protein sequence | MSTITSRQQS WHTRQLKRSL RAVQFRKEIV ALGLVAPLVL FILLVFVMPV ASMISRSIQS
PEVVDALPKT TSALRHWDGK SSVPAEAYRA LVLDVESNGG DNDTGTAAGR LNGLKDGFRS
LFYKTTSALP FTDNDVAISA QDMQKRLIEV DPRWADTSYW QAIASVSSRY TSQYLLATID
YREGADGRIV SVENGASAYR AVFMRTFVIS GLVTLAALVL GYPLAYWISI LPARKANLVM
ILVLLPFWTS ILVRISAWIV ILQGAGLVNK ALMALQVIST PLSLLFNRTG VLIAMTHILL
PFMILPLYSV MKSIPSSYTK AAISLGSHPF GAFWKVYVPQ TLPGVCAGGL LVFITSLGYY
ITPALLGGAG DQMVSYYIAY FTNVALNWGM ACALGAVLLL VTLVLFALYR RIVGSEIKVA
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