| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4289 |
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| Symbol | |
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| ID | 4313184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1212756 |
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| End bp | 1213880 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152130 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_776176 |
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| Protein GI | 115359038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0299295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACC TGTGCCATGT AGTCAATGAA CAGGAGATGA TCAAGATGGA ACTCAAACTG
GCACTGGTCG GTTTCGGCGG AGTCAATCAG GGACTGGTGG AACTGCTCAA AAAGAAGCGT
GCGATGCTGG GTGCGGCGGG ACTCGACGTA TCGGTGACGG TGGTCGCCGA CCTGCGGCTC
GGGATCGCGA CGAATCCTCG CGGCATTGCG CTGGACGTCC TCGACGAAAC CGCGCGGCGG
GGCGTCGACG CGGAAGCGCT ACGTCGCGAT CCCGGCACGC TGGTGTCGCC GGACGTCGGC
CTCGGTGCGG TGCTGAAGGC CATCGCGTCG GAACACGTGG ATGTCGTCAT CGAGGCGACC
TTCACTGATC CGAACACCGG TGAGCCTGCG CTGTCGCATT GCCGTACCGC GCTCGAATGC
GGCAAGCACG TGATCACGAC CAACAAGGGG CCGATCGCGC TCGCGCAGCC GGCGCTGGCG
CGGATCGCCG CGCAATCGGG TGCTTGCGTG ATGTACGAGG GCACGGTGAT GAGCGGCACG
CCGGTGCTGC GGCAACTCGC GACCTCGCTG CGCGGCTGCG ACATCAACGG CTTCGCCGGC
ATCCTGAACG GCACGTCGAA TTACGTGCTC GGTGAGGTCG AGGCCGGCGC GAGCTTCGAT
GCGGCGATCC GGGATGCGCA GCAGCGCGGC TATGCGGAGG CGAACCCGGC GGCCGACGTC
AACGGTTCGG ACGTACAGCT GAAAGTCGTC ATTCTGGCGA ACGCGCTGTG GAATGCCGGC
CTCAAGCGGG GCGATGTGAC GTGCCGCGGC ATCGTCGAAC TGACCGAGCA CGACGTGCGC
GCAGCGGCGG CGGAGCGCAT GTCCTGGCGG CTGATCGGTT CTGCCGTCCG CCATCCGGAC
GGCACCGTCA CCGCGAGCGT CGAACCGCGC AAGCTGCCTG CCGGGCATCC GTTGCTTGCC
GCGAGCGGCG TGACGAACGC GATCACGTTC GACACCGACG TGCTCGGCGG GGTGACGATC
AGCGGGCCCG GTGCGGGGCG CGAGGAAACG GCGTTTGCGA TCCTCTCCGA TCTGATCGAA
CTCGCCGACA GGATTGGTGC AGCCTCGCAC GAGGTGGCCG CATGA
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| Protein sequence | MTNLCHVVNE QEMIKMELKL ALVGFGGVNQ GLVELLKKKR AMLGAAGLDV SVTVVADLRL
GIATNPRGIA LDVLDETARR GVDAEALRRD PGTLVSPDVG LGAVLKAIAS EHVDVVIEAT
FTDPNTGEPA LSHCRTALEC GKHVITTNKG PIALAQPALA RIAAQSGACV MYEGTVMSGT
PVLRQLATSL RGCDINGFAG ILNGTSNYVL GEVEAGASFD AAIRDAQQRG YAEANPAADV
NGSDVQLKVV ILANALWNAG LKRGDVTCRG IVELTEHDVR AAAAERMSWR LIGSAVRHPD
GTVTASVEPR KLPAGHPLLA ASGVTNAITF DTDVLGGVTI SGPGAGREET AFAILSDLIE
LADRIGAASH EVAA
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