| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4271 |
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| Symbol | |
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| ID | 4313166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1194793 |
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| End bp | 1195863 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152112 |
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| Product | putative virion core protein |
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| Protein accession | YP_776158 |
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| Protein GI | 115359020 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0613128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGG GTTCGTTTAT CCGCAAGCAG TTCATCGACG TCCTGCAATG GACGGAAGAC
ACCGACGGCG TGCTGGCCTG GCGCTATCCG ATGGAAGACC AGGAGATCCA GTACGGCGGC
CAGCTGACCG TGCGCGAAAC GCAGGTCGCG ATCTTCGTCA ACGAAGGCAA GGTCGCCGAC
GTGTTCCAGC CCGGGCTGTA CAAGCTGGAA ACGCGCACGC TGCCGGTGCT CACGTACCTG
AAGAACTGGG ACAAGTTCTT TCAGTCTCCT TTCAAGTCGG ACGTCTACTT CTTCAGCACG
CGGCTGCAGC TCGGCCGGCG CTGGGGCACC GCGCAGCCGG TGACGATCCG CGATCGCGAA
TTCGGCTTCG TGCAGCTGCG CGCGTTCGGC ATCTACTCGT ACCGGATCGT CGATGCGGCC
GCGTTCCACC GCGAGGTGAG CGGCACGCGC GCGCAGTACA CGGTCGACGA TCTCGAACAG
CAGCTGCGCA ACCTGGTCGT CACCGCGATG AGCACGACGT TCGGCTCGGC CGACGTGCCG
TTCGTCGACA TGGCCGCGAA CCAGACGCTG CTGTCGCAAC GCGTCGCCGA GGCGCTGGTG
CCGGTGTTCA CGCGCTACGG CCTCGCGCTC GATGCATTCG CGGTCGAAAG CGTGTCGCTG
CCGGCCGAGC TGCAGAAGGC GCTCGACCTG CGGATTGGCG CGGGGATGGC CGGCGATCTC
GGCCGCGCGA CGCAATACCA GACCGCGCAG GCGATCCCGC TGGCCGCGCA GAACCCGGGC
GGCATCGCGG GAGTCGGCGC GGGGCTCGCG GCCGGCGCGG TGATCGGCCA GGCGATGGCC
GGCCAGATCG CGGGCGCCGC GCACGCGGCG CAAGCGGCGC CGCCCGCGCC CGTCGCGGCA
CCGGTTGCGG CTGCGCAGCC GGCCGCCCCG ACCGCACCGG CGGCATCGAC CGAAGGGACC
GACTACGTGC AGCGTCTCGA GCAATTGAAG GCCCTGCTCG ACAAGGGTCT CGTGACCGAA
GAAGACTATT CGCGCGCGAA GGCGGAAATC CTCGCGAAGC TCACCCGGTA A
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| Protein sequence | MSLGSFIRKQ FIDVLQWTED TDGVLAWRYP MEDQEIQYGG QLTVRETQVA IFVNEGKVAD
VFQPGLYKLE TRTLPVLTYL KNWDKFFQSP FKSDVYFFST RLQLGRRWGT AQPVTIRDRE
FGFVQLRAFG IYSYRIVDAA AFHREVSGTR AQYTVDDLEQ QLRNLVVTAM STTFGSADVP
FVDMAANQTL LSQRVAEALV PVFTRYGLAL DAFAVESVSL PAELQKALDL RIGAGMAGDL
GRATQYQTAQ AIPLAAQNPG GIAGVGAGLA AGAVIGQAMA GQIAGAAHAA QAAPPAPVAA
PVAAAQPAAP TAPAASTEGT DYVQRLEQLK ALLDKGLVTE EDYSRAKAEI LAKLTR
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