| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4266 |
|---|
| Symbol | |
|---|
| ID | 4313161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1189549 |
|---|
| End bp | 1190982 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638152107 |
|---|
| Product | putative nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_776153 |
|---|
| Protein GI | 115359015 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0308857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG ATCCCTGCGG CTTTGCCGCG GTTCTCGCCA ATCCGATTCT CAATACGGAT
TCGTACAAGG CTTCCCACTT CCTGCAATAT CCGCCCGACG CGCAGGCGAT GTTCTCGTAC
GTCGAATCGC GCGGCGGCCG CTACGACCGC ACGCTGTTCT TCGGCCTGCA GATGCTGCTG
AAGGAATATC TGTGCCGGCC CGTCACGCAC GCGATGATCG ACGACGCGCG CGACTTCTTC
GCGGTGCACG GCGAGCCGTT CAACGAGGAC GGCTGGCGTC ATGTCGTCGA GCACTACGAC
GGCTACCTGC CCGTGAAGAT TCGCGCGGTG CCCGAGGGTT CGATCGTTCC GGTGCACAAC
GTGCTGATGA CCGTCGAATG CGACGATCCG AAGGTGTTCT GGCTCGCGTC GTATCTCGAG
ACGATGCTGC TGCGCGTGTG GTACCCGGTG ACGGTCGCGA CGCGCAGCTG GCACTTGCGG
CAGACCATCC GCCACTTTCT CGAGAAGACC GACGACGATC TCGCGCAGTT GCCGTTCAAG
CTGCACGACT TCGGCGCGCG CGGCGTATCG AGCGCGGAAT CGGCCGCGAT CGGCGGCGCC
GCGCACCTCG TGAGCTTCAT GGGTTCCGAT ACGGTGCTCG GCGTGCTGGC CGCGAACCGC
TTCTATCGCG AGCCGATGGC CGCGTACTCG GTGCCGGCGG CCGAGCACAG CACGATCACG
TCGTGGGGGC GTGAGCACGA GGCCGATGCG TATCGGAACA TGATCAGCCG CTTCGGTCTG
CCCGGCGCGA TCGTGTCGGT CGTGTCGGAC TCCTACGATC TGTTCGCCGC CCTTGAAATG
TGGGGCGGTC CGCTGCGCCA GGCGGTGATC GATTCGGGCG CGACGCTCGT CGTGCGTCCC
GATTCGGGCG ACCCGGTGAC GATCGTGCTG CAGACCGTGC GCGCGCTCGA CGCATCGTTC
GGTTCGACTG TAAACGGCAA GGGGCGGCGC GTGTTGAACC GCGTGCGCGT GATTCAGGGC
GACGGCGTCG ACGAGCTGTC GATCGGCGCG ATCCTCGCCG CGCTCGACGA CGCGGGCTAT
GCGGCCGGCA ACGTCGTGTT CGGGATGGGC GGCGCGCTGC TGCAGCAGGT GAATCGCGAT
ACGCAGCGCT TCGCGATGAA GTGCTCGGCG ATCCGGCGCG ACGGCGTCTG GCACGACGTC
CGCAAGGATC CGGTCACCGA TCAGGGCAAG CGCTCGAAGA AGGGGCGGCT CACGTTGCTG
CGCAATCGGC GCACGGGCGA GTACCGGACG GTCGCGCTGC CGGTCGCGTG GGACGATCGT
GCGCTCGAAG GCGAGTGGGA CGACGCGCTC GAAACGGTGT TCGACACGGG GCGGATGCTG
GTCGATACGA CGTTCGCCGA GGTGCGGGCG AGGGCGCACG CCGCGGAGCG ATGA
|
|---|
| Protein sequence | MQNDPCGFAA VLANPILNTD SYKASHFLQY PPDAQAMFSY VESRGGRYDR TLFFGLQMLL
KEYLCRPVTH AMIDDARDFF AVHGEPFNED GWRHVVEHYD GYLPVKIRAV PEGSIVPVHN
VLMTVECDDP KVFWLASYLE TMLLRVWYPV TVATRSWHLR QTIRHFLEKT DDDLAQLPFK
LHDFGARGVS SAESAAIGGA AHLVSFMGSD TVLGVLAANR FYREPMAAYS VPAAEHSTIT
SWGREHEADA YRNMISRFGL PGAIVSVVSD SYDLFAALEM WGGPLRQAVI DSGATLVVRP
DSGDPVTIVL QTVRALDASF GSTVNGKGRR VLNRVRVIQG DGVDELSIGA ILAALDDAGY
AAGNVVFGMG GALLQQVNRD TQRFAMKCSA IRRDGVWHDV RKDPVTDQGK RSKKGRLTLL
RNRRTGEYRT VALPVAWDDR ALEGEWDDAL ETVFDTGRML VDTTFAEVRA RAHAAER
|
|---|
| |