Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4178 |
Symbol | |
ID | 4313073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1098937 |
End bp | 1099347 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638152019 |
Product | endoribonuclease L-PSP |
Protein accession | YP_776065 |
Protein GI | 115358927 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.18793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG CAGTGAATCC GCCGGAACTC TGGGCGCCGT TCGGCGCGTT CTCGATGGCC GTGGTCCAGG GCGACGGCCG GATCGTCCAT CTGAAGGGAC AGGTCGCACT CGATAAGGAC GGACACGTCG TCGGTGCCGC CGACATGTGC GCGCAGGTCC GGCAAACGCT CGGCAACATT CGCGACGTGC TCGCCGCGAT GGGCGGGCAG ATGCAGGATG TGATCTCGCT GGTTCACTAC GCGACCGACA TCGACGCGTT CATGCAGGCC GGCGACATCC GCGAGACGTT CTTCGCCGAA CCCTATCCGG TGACGACAAC CGTCCAGGTC GAACGTCTGT ACCGCCCCGA CCTGCTGATC GAAATCGCGG CGATCGCGGA AATTCCGCGC GCGCGATTCC GCATGCGTTG A
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Protein sequence | MAEAVNPPEL WAPFGAFSMA VVQGDGRIVH LKGQVALDKD GHVVGAADMC AQVRQTLGNI RDVLAAMGGQ MQDVISLVHY ATDIDAFMQA GDIRETFFAE PYPVTTTVQV ERLYRPDLLI EIAAIAEIPR ARFRMR
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