Gene Bamb_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4088 
Symbol 
ID4312983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1009676 
End bp1010077 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content68% 
IMG OID638151929 
Producthypothetical protein 
Protein accessionYP_775975 
Protein GI115358837 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCC ATCCTCTGCG TCTTTCCCCC GGCGACGATC TGCGCGCCGC CATCGAGCAC 
GCGTCGCGCG GGCTTCGCGC ACACGCGGCA TTCGTGATCC AGGGCATCGG CAGCCTGAAC
GTCGCGCAGT TGCGCTATGC CGGCGTCGAC TCACCGACCG AACTGCGCGG CGACCTCGAA
ATCCTGACGC TGGCCGGTTC GGTCTCGCCG GACGGCGCGC ACCTGCACAT GTCGGTTTCC
GACGCGCAAG GCCGCGTATC GGGCGGGCAC GTCGCAAGCG GCTGCGTGGT GCGTACGACC
GCCGAGATAC TGCTCGTGCT GTTGCCCGCG CATCGTTTCT CGCGTGAACC CGACGCGGGC
ACCGGTTTCA ACGAGCTGGT GATTCGCCCG GACATCGGCT GA
 
Protein sequence
MQAHPLRLSP GDDLRAAIEH ASRGLRAHAA FVIQGIGSLN VAQLRYAGVD SPTELRGDLE 
ILTLAGSVSP DGAHLHMSVS DAQGRVSGGH VASGCVVRTT AEILLVLLPA HRFSREPDAG
TGFNELVIRP DIG