| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4051 |
|---|
| Symbol | |
|---|
| ID | 4312946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 969641 |
|---|
| End bp | 970495 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638151892 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_775938 |
|---|
| Protein GI | 115358800 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.606147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.806612 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG AAGCAATCAC CACGGATTCC CTCGCGGTTG CCGAGCGCGT GCGCGAGCTA
ATGACCCGCA ACGGCATCGG CAAGCGCCAG CAGACCACCG AGCTGTGCCG CATCCTCGAC
CTGAGCTTTT CGCAAGGTCA CCGCAAGTTG CGCGGCAGCA GCCCCTGGAC GCTCGCGCAA
ATCAAGAAAG TCGCCGAAGC CTACGGCGAG CCCGCCGCAC AACTGTTCGG CGCGCAAACG
CTCGACCCCG GCATGGTCGG CGCCTATTCG CAGGAGGCGG TGCTGTACGC CGGCGTCGCC
GAAATTCCGT GCACCGCATG GATCGGTGCG CCGCTCGAAG CGGGCGCGCG CCCCGAGTTC
GTCGCCTATG AACAGAACGG CCGCTGGCGC GTGCTGCGCC ATACGGGCGT GCTGTACCAG
AACGCCTACG ACGTGCACAA GATCGAGATC TATCCGCGCC GCGCGGAGAG CGACAAGCTC
GTCGTCGCGG TGATCGATCC CGACCGCGTC AGCGCGACCG AGCTGTGCCG CTATCTCGAA
CGGCAGGGTT TCGCGACGGC CGCGTTCGAC GGCCTCGCGC CGTTCGTCGA TGCGCTGCAG
GGCCAGGCGT TCGACGCGGT CGTCACCGAG TGGCTGTTCG ACGGCAGCAC GGCCGCCACC
GCGATCAAGG CGGTGCGCAC GTCCGACAAT CCGGGCGCGC CGATCTTCGT GCTGACGGGC
GACCTGCTCA CCGGCCGCGC GAGCGAAGCG GACATCAGCG AAGTGATCCG CGCGTTCGAC
GTCGTCTGCT ACGAAAAACC CGCGCGCATG GCGATCCTCA GCGCCGATCT CGCAAAACGG
CTCGCACGCG GGTAA
|
|---|
| Protein sequence | MTTEAITTDS LAVAERVREL MTRNGIGKRQ QTTELCRILD LSFSQGHRKL RGSSPWTLAQ
IKKVAEAYGE PAAQLFGAQT LDPGMVGAYS QEAVLYAGVA EIPCTAWIGA PLEAGARPEF
VAYEQNGRWR VLRHTGVLYQ NAYDVHKIEI YPRRAESDKL VVAVIDPDRV SATELCRYLE
RQGFATAAFD GLAPFVDALQ GQAFDAVVTE WLFDGSTAAT AIKAVRTSDN PGAPIFVLTG
DLLTGRASEA DISEVIRAFD VVCYEKPARM AILSADLAKR LARG
|
|---|
| |