Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4021 |
Symbol | |
ID | 4312916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 938683 |
End bp | 939459 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151862 |
Product | ABC transporter related |
Protein accession | YP_775908 |
Protein GI | 115358770 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATG TCGACCACGC GTCGATCCGT TTTCCGACCC GCACGGGTCA TGTCGACGCC GTGCGCGATG CAAGCTTCGC GGTACGCGAC GGCGAGGTGT TCGGGCTCGT CGGTGAATCG GGCTCCGGCA AGTCGACGCT GCTACGCGCG CTGACCGGCC TCGTGCCGCT CGCGGGCGGC AGCCTGTCGA TCCACGGCCG GCCGGTGGGC GGCACGCCCG AGCGCGCATT CCGCCGCCAG GTGCAGATGG TGTTCCAGGA TCCGTACGGG TCGCTGCATC CGCGCTTCAC GGTCGACCAG ACGCTGCGCG AGCCGCTGTC GATCCACGGA ATCGGGGACG CCGACGCGCG CATCGCTCGC GCGCTGTCGG AGGTCGGGCT CGGCCCGGCA TTCCGCTTCC GGTATCCGCA TCAGTTGTCG GGCGGCCAGC GCCAGCGCAT CGCGATCGCG CGCGCACTGA TCGTCGAGCC GCGCGTGCTG CTGCTCGACG AGCCGACCTC CGCACTCGAC GTGTCGGTGC AGGCCGAAAT CCTGAACCTG CTGCGCCGCC TGCATCGCGA ACGCAACCTG ACGATGATCC TCGTGAGCCA CAACCTCGCG GTGATCGGCT TCCTGTGCCA GCGCGTCGCG GTGATGCAGC ACGGCGAGAT CGTCGAGCAG CTGCGGATCG AGGACGTGCG CGCCGGCCAG GTCGCACGCG ATTACACGCG CACGCTGCTG CGCGCGACCG AAGGCTATCG CCGGCTGGAT CCGGCGATCG ACGCGCCGGC GGGCTGA
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Protein sequence | MIDVDHASIR FPTRTGHVDA VRDASFAVRD GEVFGLVGES GSGKSTLLRA LTGLVPLAGG SLSIHGRPVG GTPERAFRRQ VQMVFQDPYG SLHPRFTVDQ TLREPLSIHG IGDADARIAR ALSEVGLGPA FRFRYPHQLS GGQRQRIAIA RALIVEPRVL LLDEPTSALD VSVQAEILNL LRRLHRERNL TMILVSHNLA VIGFLCQRVA VMQHGEIVEQ LRIEDVRAGQ VARDYTRTLL RATEGYRRLD PAIDAPAG
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