| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3990 |
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| Symbol | |
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| ID | 4312886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 899532 |
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| End bp | 900374 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151832 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_775878 |
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| Protein GI | 115358740 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0601585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC GTTTCCCGCT TCGACGTTTC CTCCGCGGCG CGCTCGTGCC GCTTGCGTTC
GTGTGCTCGC TCGCGGCCGC GGCTCCGCTG CAGACGGTGC GGCCCGGCAC CTTGCTGGTG
GGCTCCGACC TCACGTATCC GCCTTACGCG TACCTCGAAG CCGGCAAGCC CGCCGGCTTC
GACGCCGAGT TCGCGCGGCT GCTCGCGCGT CACCTGAAGC TGGAGCCGGT GTTCCTCGAC
ACGCGGTTTC CGGACCTGAT CCTCGGCATG AAGGCGCGCC GCTTCGACGT CGTCGCGTCC
GCGCTGTACG TGACGCCCGA TCGCGTGAAG CAGGTCGATT TCGTGCCGTA CCTGAAGACG
GGCGCATCGC TGCTCGTCGC GAAGGGCAGC GCGTTCCTGC CGAAGACGCC GCAGGACCTG
TGCGGCAAGC GGGTCGGCTC GATCAAGGGT GCGTCGTGGA CGCCGAAGCT GCGTGCGGTG
TCGCAGGACA CGTGCAAGGC GGCCGGGCGC GGCGAGATCG CGATCCTCGA GTTTCCGACG
TCGCCGGAAG CGACGTCGGC GCTGATGTCG AAGGCGGTCG ATGTCCAGAT CGAGGACGCG
GCCGTCGCGC AGGGGATTCC GAAACAGACG AACGGGCGTG TCGACATCAG TTCGACGACG
CTGTTGTATC CGATCGTCAT CGGCCTCGGC ATGACGAAGG GCGATAGCGG CCTGCAGGGT
GCGCTCGAGC GCGCATTGAA CGATGCGAAG CGCAGCGGCG AGTACGGCAG CCTCGTGAAG
AAATACGGGT TGCAGGAGCC GACGGCCGCC GACGTCGCCA ATGCGCTCAG TACTACGAAG
TAG
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| Protein sequence | MSARFPLRRF LRGALVPLAF VCSLAAAAPL QTVRPGTLLV GSDLTYPPYA YLEAGKPAGF
DAEFARLLAR HLKLEPVFLD TRFPDLILGM KARRFDVVAS ALYVTPDRVK QVDFVPYLKT
GASLLVAKGS AFLPKTPQDL CGKRVGSIKG ASWTPKLRAV SQDTCKAAGR GEIAILEFPT
SPEATSALMS KAVDVQIEDA AVAQGIPKQT NGRVDISSTT LLYPIVIGLG MTKGDSGLQG
ALERALNDAK RSGEYGSLVK KYGLQEPTAA DVANALSTTK
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