| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3989 |
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| Symbol | |
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| ID | 4312885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 897945 |
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| End bp | 899447 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151831 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_775877 |
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| Protein GI | 115358739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.228194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.451936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCG ATTGGCACTA TGCGTTTCAG CTCTTGTGGG ACAAGGATTT CTGGCGCGCC
TGCGTCGTGG TCGTCGAACT CAGCGTCGTG GCATGGCTGC TCGGCGTGTT GCTCGGGTTT
CCGGTGGCGC TCGCGAGACA GTCGCACCGG CCGCTGCTGA AGCGGGCGGC GGCCGTCTAC
ATCTGGTTCT TCCGCAGCCT GCCGCTGCTC GTGCTGCTGG TCTTCATCTA CAACCTGCCG
CAGGTCTTTC CCGCAACCAG CGCGGTGCTG TCCGATCCGT TCACGGCCGG CCTGATCGCG
ATGGTGCTGA GCGAGACAGC GTATTTCGCG GAAATCCATC GCGGCGGGAT CCTGTCGGTG
CCGCGCGGGC AGCTCGAGGC CGGCCGCGCG CTGGGCATCC GCTTCGCCGG CATCCAGCGG
TTGATCGTGA TGCCGCAGGC GATCCGCATC GCGCTGCCCG CGCTCGCGAA CGAGTTCATC
ACGATCGTGA AGCTCACGTC GCTGGTGTCG GTGATTTCGC TGGCCGAGAT TCTGCTCGTC
GGACAGCGGC TGTACACGCA GAACTTCCTC GTGTTCGAAA CGATGCTGGC CGTCGCGTTC
TACTACGTGT TGATCGTGAC CGTGTTCAGC CGGCTGCTCG GCTATCTCGA GCGGCACCTC
GACGTCAGTC GGCGCACGCC CGTCCAGGCC GACGAGATCG ATCTCGCGCT GCCGCCGTCG
GCGCCGGCCG TCGCGCCGAG GCAGCGGGCG AACGCCGAAT TCGCGCTTCG CCTGAAAGGC
GTGCAGCAGC GCTACGGCCG CAACGAAGTG TTGAAGGATA TCCATCTCGA TGTCGTGCCC
GGGCAGGTCG TGTCGATCAT CGGCCCGTCC GGCTCGGGCA AGACGTCGCT GATCCGCACG
ATCAACGGGC TCGCACCGGT GAACGCGGGC GAGATCGACC TGTACGGCGA GCCGTTCATC
CGCGCGTCGG GCTCGCATCC GCCGCGCGTG TCGCACGAGT GCATCCTCGA TATCGGCATG
GTGTTCCAGA GCTTCAACCT GTTCCCGCAC CGCACCGCGC TGCAAAACGT GATGATGGCG
CCGTGCTATC ACCGGCAGGC CGATGCGGCG GCGATCCGGC TGCAGGCGCT GTCGCTGCTC
TCGAAGGTCG GGATGCTCGA ACATGCGAAC AAGTATCCGC ACCAGCTTTC CGGCGGCCAG
CAGCAGCGTG TGGCCATCGC GCGCGCACTC GCGACGCGGC CGTCGATCAT GCTGTTCGAC
GAGCCGACGT CGGCGCTCGA TCCCGAACTC GTCGGCGAAG TGCTGAAGGT CGTCGAGACG
CTGGCGAAGG AAGGGATGAC GATGATCATC GTGACGCACG AAATGAACTT CGCGTTCAAG
GTCTCCGACC GGATCGTGTT CATGGAGAGC GGGCGCATCC TGTACGACGT GCCGCCGGAG
CGGATTCGCG GCAGCGGCGA CGCGCGCGTG AACGATTTTC TGAAACACGT TCACATCGCA
TGA
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| Protein sequence | MQFDWHYAFQ LLWDKDFWRA CVVVVELSVV AWLLGVLLGF PVALARQSHR PLLKRAAAVY
IWFFRSLPLL VLLVFIYNLP QVFPATSAVL SDPFTAGLIA MVLSETAYFA EIHRGGILSV
PRGQLEAGRA LGIRFAGIQR LIVMPQAIRI ALPALANEFI TIVKLTSLVS VISLAEILLV
GQRLYTQNFL VFETMLAVAF YYVLIVTVFS RLLGYLERHL DVSRRTPVQA DEIDLALPPS
APAVAPRQRA NAEFALRLKG VQQRYGRNEV LKDIHLDVVP GQVVSIIGPS GSGKTSLIRT
INGLAPVNAG EIDLYGEPFI RASGSHPPRV SHECILDIGM VFQSFNLFPH RTALQNVMMA
PCYHRQADAA AIRLQALSLL SKVGMLEHAN KYPHQLSGGQ QQRVAIARAL ATRPSIMLFD
EPTSALDPEL VGEVLKVVET LAKEGMTMII VTHEMNFAFK VSDRIVFMES GRILYDVPPE
RIRGSGDARV NDFLKHVHIA
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