Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3967 |
Symbol | |
ID | 4312863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 865340 |
End bp | 867127 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151809 |
Product | Cl- channel, voltage-gated family protein |
Protein accession | YP_775855 |
Protein GI | 115358717 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.995893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.198047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CACATAAACG CGATTTCTCG ACCAACGAAC GCCTGCCCAG GATCGCGTTG CTCGCCGCCG GGATCGGCTT GCTCAGCACG CTGGCGGCGT TCGTGCTGTT GAGCCTGATT CACCTGTTCA CGAACCTGTT CTTCTTCCAG CAGTTTTCGT TCACCGAACG TTCGCCCGCG AACCATACGC TCGGCGCATG GGTGATCGTC GTGCCGGTGA TCGGCGGATT GATCGTCGGG CTGATGGCGC GCTTCGGTTC GGAGAAGATC CGCGGCCACG GCATTCCCGA GGCGATCGAG GCGATCCTGT TCGGCAAGAG CCGCATGTCG CCGAAGGTCG CGATCCTCAA GCCGCTGTCG TCGGGCGTCG TGATCGGCAG CGGCGGCCCG TTCGGCGCCG AAGGCCCGAT CATCATGACG GGCGGCGCGC TCGGCTCGCT GATCGCGCAA TGCGTGCACG TGACCGCCGC CGAGCGCAAG ACGCTGCTCG TCGCGGGCGC GGCCGCCGGC ATGACCGCCG TGTTCGGCAC GCCGGTCGCC GCCGTGCTGC TCGCGGTCGA GCTGCTGCTG TTCGAATGGC GTCCGCGCAG TTTCCTGCCG GTCGCGCTCG CCTGTGCGGT CGCCGGTTTC GCACGCGCGG TGTTCTTCGG CGTCGAGCCG CTGTTTCCGC TCACCACCGC ATCGCCCACG CCCGTCGCGC TGCTGTCGTG CATCGTCGCG GGCTTGCTGT CGGGCATGCT CGCGTGCGGG CTGTCGGCGG CGCTGTACCG CGTCGAGGAC ACCTTCGCGA AGCTGCCGGT GCACTGGATG TGGTGGCCGG CGCTCGGCGC GATCGTGATC GGCATCGGCG GCTGGCTCGA GCCGCGCGCG CTCGGCGTCG GCTACGACGT GATCGGCGAC CTGCTGCATC AGCACATCGC GCTGAAGATC GCGCTGGCAC TGTTGATCGT GAAAGCCGTG ATGTGGGTGA TCGCGCTCGG CTCCGGCACG TCCGGCGGTG TGCTCGCCCC GCTGCTGATG CTCGGCGCGG GCCTCGGCAC CGTGCTGTCG CCGGTGCTGC CCGGCGGCGA TCCGGCGCTG TGGCCGCTCG TCTGCATGGC CGCGACGCTC GGCGCCACGC TCGGTGCACC GCTCACCGCG ATCGTGTTCG CGTTCGGCCT CACGCACGAC GCAAACGCGC TGCTGCCGCT GCTCGCGGCG ACGCTCGTCG CGCACGGCTT CGCGACCATC GTGATGAAGC GCTCGATCAT GACGGAAAAG ATCGCGCGCC GCGGTTATCA CATCTATCGC GAATACGGCG TCGATCCGCT CGAACGTCAT GACGTGACTG AAGTGATGAC GCCCGCCGAC GCGCTCGTCG CGATCGACGG CGCCACGCCG CTCGACGCCG TCGAGTCGCA ATACTTCGGC GCGAAGCAGA CGCATCGTGC GTACCCGGTC GTGCAGAATG GCCGCCTGCT CGGCCTCGTC GATCGCGCGA CGCTCGACGC GCACCGCGCG CAAGCCGGGC CTGACGCACC GCTCGCGAGC GCGTTCGCCG ATCGCGCACC GGCCGTCGCG CAGGCACACG AGACGTGCCG CGTGGTCGCA TCGCGACTCG CGATGCTCGG CCTCGAACGG CTGCCGGTCG TCGACGATCC GCAATCGCTG CGCGTCACCG GCATCGTGTC GCGCAGCGAC CTGATCAAGC CCGCGCTCCA GCACTTCGAC GACGAACAGA AACGCGAGCG CTTCCGCCCG GTCGTGCCGG TCAACCTGCG CGATATCGGC GCCCGCAAGG TCGGCTGA
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Protein sequence | MNAPHKRDFS TNERLPRIAL LAAGIGLLST LAAFVLLSLI HLFTNLFFFQ QFSFTERSPA NHTLGAWVIV VPVIGGLIVG LMARFGSEKI RGHGIPEAIE AILFGKSRMS PKVAILKPLS SGVVIGSGGP FGAEGPIIMT GGALGSLIAQ CVHVTAAERK TLLVAGAAAG MTAVFGTPVA AVLLAVELLL FEWRPRSFLP VALACAVAGF ARAVFFGVEP LFPLTTASPT PVALLSCIVA GLLSGMLACG LSAALYRVED TFAKLPVHWM WWPALGAIVI GIGGWLEPRA LGVGYDVIGD LLHQHIALKI ALALLIVKAV MWVIALGSGT SGGVLAPLLM LGAGLGTVLS PVLPGGDPAL WPLVCMAATL GATLGAPLTA IVFAFGLTHD ANALLPLLAA TLVAHGFATI VMKRSIMTEK IARRGYHIYR EYGVDPLERH DVTEVMTPAD ALVAIDGATP LDAVESQYFG AKQTHRAYPV VQNGRLLGLV DRATLDAHRA QAGPDAPLAS AFADRAPAVA QAHETCRVVA SRLAMLGLER LPVVDDPQSL RVTGIVSRSD LIKPALQHFD DEQKRERFRP VVPVNLRDIG ARKVG
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