| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3962 |
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| Symbol | |
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| ID | 4312858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 860937 |
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| End bp | 861845 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151804 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_775850 |
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| Protein GI | 115358712 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0195836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.175267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAC TGAACCAGCT TCGCTGCTTC GTCGCCGTCG CCGAGGAACT GCATTTCGGG
CGCGCGGCCA AGCGGCTGTT CATGACGCAG CCGCCGCTCA GCCGGCAGAT CCAGTTGCTC
GAGCACGCGC TCGGCATCGC GCTGCTCGAG CGCAGCAGCC GGCAGGTCAG GCTGACCGCG
GCCGGCGAGC GCTTTCTGCG CGATGCGCGC CACATCCTCG AGTTTTCCGC ACGGGCCGAG
CAGGCCGCGC AGCGCGTCGC GCACGGCGGG GCCGGCCGCA TCACGCTCGG CTTCACGGCG
GTCAGCGCGT ACCGGATGAT TCCGGTGCTG CTCGCGCATG CGGCGCACGC GCTGCCGGAC
GTCGATGTCG AGTTGCGCGA AATGGTGTCG ACCGTGCAGA TCGACGCGCT TGCGTCGCGC
ATGCTCGATG CGGGCTTCGT GCGCCAGCGC GCCGCGCGCC ATCCGCTCGA ATACCGGCTC
GTGCAGCGTG AGCCGATGCT CGTCGCGGTC GCGCAGGGCT CTACGCTCGC CGCGTACGAA
CGGATCGGCC CGGACGAACT CGACCGGCAG CCGTTCATCG CGTATTCGCC GAACGAGGGG
AAGTACTTCC ACGACATGAT CTCGGGGATG TTCGCCGGCG CCGGCCGCTT GCCGAACTAC
CTGCATTACG TCGGGCAGAC GCATACGATC CTCGGCCTGG TGCGCGCGGG GCTCGGCGCC
GCGCTGGTGC CGGCGTCGGC GCGCGAGCTG CATGTGGACG GCGTGGTGTT CCGGCCGCTC
GCGGGCGTCG ACGTGGCGGC CGAGCTGTAT CTCGCCTGGC GCGCGGACAA CGACAATCCG
GCGCTGCCGG TGTTCAACGC GATGGTCGAG CGGTTTCTGA CGGAAGGGGC GGATGGTGGC
GGCGTTTAG
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| Protein sequence | MIELNQLRCF VAVAEELHFG RAAKRLFMTQ PPLSRQIQLL EHALGIALLE RSSRQVRLTA
AGERFLRDAR HILEFSARAE QAAQRVAHGG AGRITLGFTA VSAYRMIPVL LAHAAHALPD
VDVELREMVS TVQIDALASR MLDAGFVRQR AARHPLEYRL VQREPMLVAV AQGSTLAAYE
RIGPDELDRQ PFIAYSPNEG KYFHDMISGM FAGAGRLPNY LHYVGQTHTI LGLVRAGLGA
ALVPASAREL HVDGVVFRPL AGVDVAAELY LAWRADNDNP ALPVFNAMVE RFLTEGADGG
GV
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