Gene Bamb_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3895 
Symbol 
ID4312791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp788143 
End bp789387 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content68% 
IMG OID638151737 
Productmajor facilitator transporter 
Protein accessionYP_775783 
Protein GI115358645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.943711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCAT TCCGCATCGG TCCTGGTCCA TACTGTCTCG CAATCGACCA CTCCCCGACC 
GTCGTCGCGC GGTTGGCTGT CATGCGCGTT CATAGTGCAT TGCTCTTTCT CGTCGGCACC
CTGCTTACCG CGGGCGGCTA CGGCGCCACG TTCCTGCTGT CGATGCGTTT TCGCATGATC
GGCGGCAGCG ATCTCGATAC CGGCGCGGCC CTGGCCGCCG CGACGGTCGG CACCTTCGCC
GGCCTGTCGG TGGTCGGCTG GTTCTCGCGG CAGATCGGCG CCGCGCGAAT CGCCGCGTTG
TCGTCGCTGT GCATCGGTGC CGGCATCGTG GGCTTCGCAC TCGTCGGGCG CGCGCCGTCC
GCCGACTTGC TGGCCGGCTT CCTGGTCGGC TTCGGCTGGG GCGCGTTTCA CCTGGCCGCA
CCAATGTCGC TCGCGGAGCG CACCAGCGGC GCCGCGCGAA ACGTCTGGTT CTTCCGGTCG
GCGACCTTCC AGATGACGGG GATCGGCGCA TCCCCGGCAT TTGCCGCGTA TGCGATGCGG
GTGCTCCACT GGTCGATCGA CGACACGCTT TACGCGGTCG GCGCGCTGTG CGCACTCGCG
TCGCTGATGC TGGAGGCGTT CGGCCGCCTG TGTCCGCGCC CGCCCGCCGC CGTGTCCGGC
GGCCGCTGGG TCCGCGAGCT TCGCGCCATT TCGCGCACGC GCGCGGCCGT GCCGATCGCG
ATGATCGCGC TCGGTACCTG CGTGTTCTCG GGCCTGATGA CGTTCCAGAT GTCGTTCATG
CAAGGCACGC AAGCGCGCCC GGGCACATTC TTCAGCCTTT ACACGGTGAC GGTCGTGACC
GCGCGCTGGC TGCTCGGCAA ATGGGTGCGA ATGGCGCGTC CGGAAATCGC GACCAAAGGG
TTGCTCGTGA CGATGTTGCT CGGGGCGCTC GCGATGTTCG GCGCGTCCTC GCACGCGTCG
TTCCAGTCGA TCGCGGCGGT GCTGCTCGGC GCAGGCTACG GGCTCGTGTA TCCGGTCATC
CAGGCGCAGG CGCTCAACGA TTGCCCGCCC ACGCAACAGC ACGGCGTGCT CACGTGGTTC
GTCGCGTCGT ATTTCATCGG CACGTTCGGC TTTCCGTCGG TCGGTGGCTG GGTGATGGTG
CACGCGGGCA AGGGTGCGTT GCTGATGCTC ATCGCGAGTT GTGGTCTCGC GGCGCTGTCG
CTCGCGTTCC TGCACGACCG CCCGGCGCCG GCGCGCACGC GATGA
 
Protein sequence
MRAFRIGPGP YCLAIDHSPT VVARLAVMRV HSALLFLVGT LLTAGGYGAT FLLSMRFRMI 
GGSDLDTGAA LAAATVGTFA GLSVVGWFSR QIGAARIAAL SSLCIGAGIV GFALVGRAPS
ADLLAGFLVG FGWGAFHLAA PMSLAERTSG AARNVWFFRS ATFQMTGIGA SPAFAAYAMR
VLHWSIDDTL YAVGALCALA SLMLEAFGRL CPRPPAAVSG GRWVRELRAI SRTRAAVPIA
MIALGTCVFS GLMTFQMSFM QGTQARPGTF FSLYTVTVVT ARWLLGKWVR MARPEIATKG
LLVTMLLGAL AMFGASSHAS FQSIAAVLLG AGYGLVYPVI QAQALNDCPP TQQHGVLTWF
VASYFIGTFG FPSVGGWVMV HAGKGALLML IASCGLAALS LAFLHDRPAP ARTR