Gene Bamb_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3857 
Symbol 
ID4312753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp744655 
End bp745725 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID638151699 
Producthypothetical protein 
Protein accessionYP_775745 
Protein GI115358607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.996632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT CCGGCGACGG CCTGACCAGT CCAGCGCGGC TCCTGCGACT CGCGTCATGG 
GCAATTGCGA TCATCTTCGC GATCTTTCTC AACATGCTCG GCGGTCTGGT GATCCGCGAC
ATGGCGTTCG CGCCGAGCGG CGGTCCGCCC GTCATCGAGC AATTCGCCGA TACTCAGGCA
AAGGCGCGGC TGGACGCGGC GCGGCGCGGT CTGCAGGCGC AGCACGACGC GCTTGTCGAG
AAGGCCGACA CAATGGAAGT GGCGCGCGGC CGCGCCGCGA AGGAGTACGC GGCCGAGAAG
GAAAGTTTCC GCAACTGGGT GGCAACCCGC TCGGTGACAG GAGACAGCGC GAGGAACCCG
GACATTCTGG CCAGAACGCA CAAGCTTGAT ACGCTCCAGG CCGTGGTGGT CAACTGGCAG
CATCAGATCG ATGCGATCGG CGACCAGCAA CGGGCACTGA GCTCGCAGCA GACTCAAGTG
GACACGCAAA TCGCCGAAGC GAACGCGGTA GCCGAACGGC GCTTCGACGC GGCAACACGG
CACTACGAGA TGCAAGTGTT CGGGCTTCGG CTGGCGCTGA CGTTACCGAT ACTGCTGGTT
GCGATCTGGC TGTTCATCCG CTACCGCAAG GTGCGCTACT GGCCGTTCGT GTATGGTTTT
GGCCTGTTTG CACTGAGCGC GTTTTTCGTT GAACTGGTTC CGTACCTGCC GAATTTCGGC
GGCTATGTCC GGGTTCTGGT CGGCATTGCA CTCACGGTAT TCGCCGGCCT TTACATGATG
AAGGCATTTC AGCGCTATGC CGAACGCAAA CGGCTCGAAT TGCAGCAGGA TCAGGGAGCA
CGCGCGCGCA CGATCGGATA CGAAAAAGCC GTTCGGTCAC TCGAAAAAAA GCGCTGCCCG
TCATGCGACA AACAATGGAA TCTCGGCGGC GACGATTCCA CGTTCTGCGT ACATTGCGGA
TTGCGGCTTT TCAATGTCTG CGAATGCGGC GGCCGGAATT TCTTCTTCTT TCCGCATTGC
CATCAATGCG GTGCTGCGCA GGGAAATGAG TTGCCACGGT CGTCCGGCTG A
 
Protein sequence
MMNSGDGLTS PARLLRLASW AIAIIFAIFL NMLGGLVIRD MAFAPSGGPP VIEQFADTQA 
KARLDAARRG LQAQHDALVE KADTMEVARG RAAKEYAAEK ESFRNWVATR SVTGDSARNP
DILARTHKLD TLQAVVVNWQ HQIDAIGDQQ RALSSQQTQV DTQIAEANAV AERRFDAATR
HYEMQVFGLR LALTLPILLV AIWLFIRYRK VRYWPFVYGF GLFALSAFFV ELVPYLPNFG
GYVRVLVGIA LTVFAGLYMM KAFQRYAERK RLELQQDQGA RARTIGYEKA VRSLEKKRCP
SCDKQWNLGG DDSTFCVHCG LRLFNVCECG GRNFFFFPHC HQCGAAQGNE LPRSSG