| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3801 |
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| Symbol | |
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| ID | 4312697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 670122 |
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| End bp | 672422 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151643 |
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| Product | helicase c2 |
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| Protein accession | YP_775689 |
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| Protein GI | 115358551 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.354929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATG TCGTCGCCGT GCGGGCCATG TGCGAGTTCA CCGCGCGACG CGGCGATCTC
GACCTGCGCT TCACGCCCGC GCCGACCGCA CTCGAAGGCA TCGCCGGTCA TGGCGCGGTC
ACGTCGAAGC GCGGCGCGCG CTACGAAACC GAGATCGCGC TGAGCGGCAC CTGGGGCACG
CTGACCGTGC GCGGGCGCGC GGACGGTTAC GATCCGGTCG CGAACCGGCT CGAGGAGATC
AAGACCTACC GCGGCAGCCT CGATGCGATG CCGGCCAATC ATCGCGCGCT TCACTGGGCG
CAGGCGAAGG TCTATGCGCA CCTGATGTGC GACGCACGCG GCCTTACGGA AATCAACGTC
GCGCTCGTGT ATTTCGACAT CGTGTCCGAG CGCGAGACCG TGCTGACGGA AACGCTGAGC
GCCGACGTGC TCGCCGCGTT CTTTGCGGAG CAGTGCGCGT GCTTCGTCGG CTGGGCCGAG
CGCGAGACCG CGCATCGTGC GGCCCGCGAT GCGGCGTTGC GTGCGCTGGC GTTTCCGCAC
GGGCAATTCC GCAGCGGTCA GCGCGAGCTG GCGGTGTCCG TCTATCGGGC CGCGCGCGAC
GAACACTGCC TGATGGCGCA GGCGCCGACC GGCATCGGCA AGACGCTCGG CACGGTCTTC
CCGCTGCTGA AGGCGTGCGG CGAGGGCGAG CTCGATCACG TGTTCTTCCT GACCGCGAAG
ACGCCCGGCC GCGCGCTCGC GCTGGAGGCG GCGACGACGC TCGGCGCCGG CACGCCGGCG
CTGCCGCTGC GCGTGCTGGA GCTCGTCGCC CGCGACAAGG CATGCGAGCA TCCGGACCGC
GCGTGTCACG GCGAATCATG CCCGCTCGCG CAAGGCTTTT ACGACCGGCT GCCGGCCGCG
CGCGACGCGG CGATCGGCGC CGGGCTGCTC GATCGCGCCA CCGTGCGCGA AGCCGCGCTC
GCGCACGACG TCTGTCCGTA TTACCTGTCG CAGGAGCTGG CGCGCTGGTC GGACATGGTG
ATCGGCGACT ACAACTACTA CTACGACGGC AGCGCGATGC TGCACACGCT CGCGCAGCAG
AACCAGTGGC GGGTCGGCGT GCTCGTCGAC GAGGCGCACA ACCTGCTCGA TCGCGCCCGC
AGGATGTACA GCGCATCGCT CGACCCGTTC GCGTTCGCAG CCGCGCGCGA GGCGGCGCCG
GCGGCGCTGC GCAAGGCGTT CGACCGGCTC GCGCGCGCGT GGGGCACCGT CAATCGCGCA
CAGGCCGAGC GCTATGCGGC CTATCCGGAG ATTCCGGGCC CGATCGTGTC GGCCGTGCAG
AACCTCGTCG CGACGATCGG CGAACACCTG ACCGATGCGC CGCGCGCGAA CGACGACGCG
CTGCTGCGGT TTCATTTCGA GGCGATCCAG TTCGGCGTGC TCGCCGACGC GTTCGACAGC
GCGTCGATCT TCGACGCGAC GCTGCACGGC GAGCCGCTGC CGCGCCAGTC GGGGCTCGAC
GGCGTCGCGC CGGCCGGGCG CCAGCGCCGC ATCCAGTCGA CGCTGTGCGT GCGCAACGTG
ATTCCGGCCG CCTTTCTCGC GCCGCGCTAC GAAGCCGCGC GCGCGACCGT GCTGTTTTCC
GGCACGCTGA GTCCGTTTCA TTTCTATCGC GACACGCTCG GGCTGCCGGC CGACACGGGC
TGGCTCGACG TCGACGGGCC GTTTCGCGCC GAGCAACTGA CCGTGCGCGT CGCGAGCCAT
GTGTCGACCC GCTGGCGCGA CCGCGACCGT TCGCTCGAAC CGATCGCGGA CCTGATCGCC
GCGCAGTATG CGACGCGGCC CGGCAACTAC CTCGGTTTTC TCAGCAGCTT CGACTATCTC
GGCCGCGTCG TCGCGTTGAT GCAGACGCGC CATCCGGACG TGCCCGTATG GGCCCAGGCG
CCCGGCATGG CCGAAAGCGA GCGCGACGCG TTTCTGGCGC GCTTCGACGC GGGCGGGCGC
GGTGTCGGCT TCGCGGTGCT GGGCGGTGCG TTCTCGGAAG GTGTGGATCT CGTCGGCGAG
CGGCTGATCG GCGCGTTCAT CGCGACGCTC GGGCTCCCGC AGGTCAACGA CGTCAACGAA
CAGATGCGGC GCGCGATGGA GGCGCGTTTC GGTAACGGCT ACGACTACAT GTATCTGTAC
CCGGGTTTGC AGAAGGTGGT GCAGGCGGCC GGGCGCGTGA TCCGCACCGA GCACGACGAG
GGCGTCGTGC ACCTGATCGA CGATCGTTAC CGGCGGCGGG AGGTGCGCGA TCTGCTGCCG
CGCTGGTGGC GGATCGGGTG A
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| Protein sequence | MSYVVAVRAM CEFTARRGDL DLRFTPAPTA LEGIAGHGAV TSKRGARYET EIALSGTWGT
LTVRGRADGY DPVANRLEEI KTYRGSLDAM PANHRALHWA QAKVYAHLMC DARGLTEINV
ALVYFDIVSE RETVLTETLS ADVLAAFFAE QCACFVGWAE RETAHRAARD AALRALAFPH
GQFRSGQREL AVSVYRAARD EHCLMAQAPT GIGKTLGTVF PLLKACGEGE LDHVFFLTAK
TPGRALALEA ATTLGAGTPA LPLRVLELVA RDKACEHPDR ACHGESCPLA QGFYDRLPAA
RDAAIGAGLL DRATVREAAL AHDVCPYYLS QELARWSDMV IGDYNYYYDG SAMLHTLAQQ
NQWRVGVLVD EAHNLLDRAR RMYSASLDPF AFAAAREAAP AALRKAFDRL ARAWGTVNRA
QAERYAAYPE IPGPIVSAVQ NLVATIGEHL TDAPRANDDA LLRFHFEAIQ FGVLADAFDS
ASIFDATLHG EPLPRQSGLD GVAPAGRQRR IQSTLCVRNV IPAAFLAPRY EAARATVLFS
GTLSPFHFYR DTLGLPADTG WLDVDGPFRA EQLTVRVASH VSTRWRDRDR SLEPIADLIA
AQYATRPGNY LGFLSSFDYL GRVVALMQTR HPDVPVWAQA PGMAESERDA FLARFDAGGR
GVGFAVLGGA FSEGVDLVGE RLIGAFIATL GLPQVNDVNE QMRRAMEARF GNGYDYMYLY
PGLQKVVQAA GRVIRTEHDE GVVHLIDDRY RRREVRDLLP RWWRIG
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