Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3750 |
Symbol | |
ID | 4312646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 611533 |
End bp | 612330 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151592 |
Product | short chain dehydrogenase |
Protein accession | YP_775638 |
Protein GI | 115358500 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.759857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTT CCGACCTGCT GAAACCCTAT GACGGCCTGC GCGTGCTCGT GACGGGCGGC GCGTCGGGCA TCGGTCTCGA GATCGCCGAC GCGTTCGCCG AATGCGGCGC GCGCGTCCAC GTGTGCGATG CGTCGCAAGC CGCGATCGCG GCGCTGGCGG ACCGGCCGTC GCGCGCCGCG ATCACTGCGA CGCTGGCCGA CGTATCCGAT CCGGTCGCGG TCGAACGCGT GTTCGCGGAC ATAGCGACGA CGCTCGGCGG CCTCGACGTG CTCGTCAACA ACGCAGGCAT CGCCGGCCCC ACGGGCGGCA TCGACGAAAT CGACCCCGTG CAGTGGGAGC AGACGATCGC GATCAACCTG AACGCGCAAT TCCAGTTCGC GCGGCGCGCG GTGCCGCTGT TGCGTGACGC GAAGCACGGC GGCGCGATCA TCGCGCTGTC GTCGGTCGCG GGGCGGCTCG GCTACGCGTT CCGCACGCCC TATGCGGCGA CCAAGTGGGC CGTCGTCGGT CTCGTGAAAA GCCTCGCGAT CGAGCTCGGG CCGCTCGGCA TACGCGTGAA TGCGATCCAG CCGGGCATCG TACGCGGCCC GCGGATGCGC CGCGTGATCG AAGCACGCGC GCAGCAGCTC GGCATCGGCT ACGACGAGAT GGAGAAGCGC TATCTCGAGA AGATCTCGCT GCGGCGCATG ACGGATCCGG CCGAAATCGC CGCGACCGCG CTGTTCCTGT GCTCGCCCGG CGGGCACGGC ATCACCGGGC AGGCGATTTC CGTCTGCGGC AACGTCGAAG TGCTCTGA
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Protein sequence | MTASDLLKPY DGLRVLVTGG ASGIGLEIAD AFAECGARVH VCDASQAAIA ALADRPSRAA ITATLADVSD PVAVERVFAD IATTLGGLDV LVNNAGIAGP TGGIDEIDPV QWEQTIAINL NAQFQFARRA VPLLRDAKHG GAIIALSSVA GRLGYAFRTP YAATKWAVVG LVKSLAIELG PLGIRVNAIQ PGIVRGPRMR RVIEARAQQL GIGYDEMEKR YLEKISLRRM TDPAEIAATA LFLCSPGGHG ITGQAISVCG NVEVL
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