Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3727 |
Symbol | |
ID | 4312623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 584574 |
End bp | 585824 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151569 |
Product | major facilitator transporter |
Protein accession | YP_775615 |
Protein GI | 115358477 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.274242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC CGGCCGCGGG CGTGTTCCGC TCGCTGCGCA GCTTCAACTA TCGCGTGTGG GCGGCCGGCG CGCTGGTGTC CAACGTCGGC ACGTGGATCC AGCGCACCGC GCAGGACTGG CTGGTGCTCA CGCAGCTCAC ACACCATGAC GCGTCGGCGG TTGGCATCGT GATGTCGCTG CAGTTCGGCC CGCAGCTTCT GTTGCTGCCG TGGACGGGCT ATGCGGCCGA CCGTTTCAAC CAGCGCCGGC TGCTGATGGC GACCCAGGCG CTGATGGGCG GCCTCGCGCT CGCGCTGGGG CTGCTGACGG TCGCGGGCGT CGTGCAGCTG TGGCATGTGT ATCTGTTCGC GTTCCTGTTC GGCTGCGCGT CCGCGTTCGA TGCGCCGGTG CGGCAAACCT TCGTCGCGGA GCTGGTCGGC GACCGCGAGC TTGCGAACGC GGTCGCGCTC AATTCGACGT CGTTCAACGC GGCGCGGATG ATCGGGCCGG CGGTGGCCGG CTTCATCATC GCGTCGGTCG GCACGGGCTG GGCGTTCCTG CTGAACGGCG TCAGCTTTGT CGCGGTGCTC GCGTCGCTGT CGCTGCTGCG CGCCGACGAG CTGCGCGAGA ACACGCGCGC TGTCCATACG CGGGGAAGCC TCCTCGACGG TTTTCGGTAC GTATGGCGGC GCCCGGACCT GAAGGCGACG CTCGCGATGC TGTTCCTGAT CGGCACGTTC GGGCTGAATT TTCCGCTGTT CATCTCGACG ATGGCGGCCG GTGTGTTTCA CGTCGATGCG CGCGGCTTCG GCATCCTGTC GTCGATGATG GCGGTCGGCA CGATCTCGGG CGCGTTGCTC GCGGCGCGCC GCGAACGGCC GCGGTTCCGG CACTTGTGGA TCGGCGCGGC CGTATTCGGG ATCGGCTGCA CGCTCGGCGC GATCGCGCCG AGTTACTGGC TGTTCGCGGC GGCGCTCGTG CTGACCGGGA TCGCCGCGAT GACGTTCACC ACGTCGACCA ATGCACTGAT GCAGCTATCG ACCGAGCCGG CGATGCGCGG GCGCGTGATG GCGCTGCGCC TCGCGGTCGC GTTCGGCGGC ACGCCGATCG GCGCGCCGGT GGCCGGTTGG GTCGCGAACC ATCTCGGCCC CCGCTGGGCG CTCGGCGTCG GCGCGGCGTC CGGGTTCGCG GCCACGCTGG TCGCCGTGGT GTTCCTGATC CAGATGACGC GACAGTCGCT GCCTGAAGGC GGCGCCGGCG GCGGAGCCTG A
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Protein sequence | MSVPAAGVFR SLRSFNYRVW AAGALVSNVG TWIQRTAQDW LVLTQLTHHD ASAVGIVMSL QFGPQLLLLP WTGYAADRFN QRRLLMATQA LMGGLALALG LLTVAGVVQL WHVYLFAFLF GCASAFDAPV RQTFVAELVG DRELANAVAL NSTSFNAARM IGPAVAGFII ASVGTGWAFL LNGVSFVAVL ASLSLLRADE LRENTRAVHT RGSLLDGFRY VWRRPDLKAT LAMLFLIGTF GLNFPLFIST MAAGVFHVDA RGFGILSSMM AVGTISGALL AARRERPRFR HLWIGAAVFG IGCTLGAIAP SYWLFAAALV LTGIAAMTFT TSTNALMQLS TEPAMRGRVM ALRLAVAFGG TPIGAPVAGW VANHLGPRWA LGVGAASGFA ATLVAVVFLI QMTRQSLPEG GAGGGA
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