Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3667 |
Symbol | |
ID | 4312563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 514069 |
End bp | 515553 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151509 |
Product | GntR family transcriptional regulator |
Protein accession | YP_775555 |
Protein GI | 115358417 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.890756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGAG GCAAAGCCGC GATTCCACTC GATCTGCCGT GCCCTGCCGG GCTGTCGACG GGCACCCCGC AATCAAAACA GGAGTGCATT GCCGATGCGA TTCGCGACGC GATCCTGAAA CGCCTGCTTC CCGGCGACAG TCCGCTGCCG TCCAGCCGGA CCCTTGCCGC ACGCTGGAGC GTCGCGAGGG GAACCGTCGA AGCGGCCTAC GACCGGTTGT CCTCCGAGGG CTACATCGCA CGAACGCGCG GCTCGGGATC CCGGGTCTGC GCGATCGTGC CCGACAGCTA TCTGCGTGCG AGCGCGCAGC CCCGGGACGG CGCGCCCCGC CGTCCCGGCA CCGCGCCGGA GCCCGAACCG ACGGGTGCGG CGGCGCCGGA ACACGCGGTA CGCCCGGGCG TTCCGTTTGT CGCGCGACTG GCCGACCCTG GCCTGCTGCC GATGCAGCAA TGGAAGAAGG CACTCGGCGC GAGCCTGCTC GCCGCGACGC CCAACGATCT CGGCTCGACG CCGTCGCAGG GCGTCGAGGG TCTGCGCGAC GAAATCGCCG CGTACCTGCG GGAATACCGC GGCATTCCAT GCGAGGCGGA CGACATCTTC ATCACTACCG GCATCCGGCA TTCGATCGAC CTCGTCGCGA GAACCGTGCT CACCCCCGGC TCGACCGTGC TGATGGAAGA TCCCGGCTAT GCGTCCGCAT GGCACATTTT CACGATGGCC GCGGCAACCG TGATCGACGT GCCGGTCGAT CGAGAAGGAA TCCAGACGGC CACGCTGGAC CTGCATGACG ATGCGTGCGC GGCCTACGTA ACGCCCGCGC ACCAGGCGCC GCTCGGCGTC ACGATGTCGG TGTCGCGCCG GCTCGAACTG CTCGACTGGG CGCAGCGCAA CCGGGCGTGG ATCATCGAAG ACGACTACGA CGGCGAATTC AGTTACCAGG CCGCCCCGCT GCCCGCGCTG AAATCGCTCG ACGCCTGCGA GCGCGTGATC TATTGCGGCT CGTTCAACAA GACGCTCTTT TCAGGGCTGC GCATCGGCTT CATGGTCGTG CCGGCGGAAC TGCGACCGGC ACTGTCGGTC GTGTGGCATG CAACCGCGCG CTCCGTCAGC GTGGCACCGC AGCTCGCGCT GGCCCGCTTC ATCGGCCACG GCGATTTTGC GAAGCACCTG CGCGCGTGCC GCCACGCGTA CCGCCAACGC CGCGATATCG TGCTCGACCA ACTGGCCACG CACGCCAGCG GACAGTTCAC GGTGTCGGGC GAGCACGCAG GTTTTCATTT CGTTCTCGGG CTGCCGCCCG CGATGGACGA GGCATCCTAC GTCGCGCGAG CCCGCACGGC CGGCATCGCG TTGCAGGCGC TCAGCGGCTT TTGCCGCAGC ACCCGCTGCG AACCGGGTGT CGTCGTCGGC TATTCGGCGC TGACGGCAGC GCACGCCCGG CACGGCGGCC GAATCCTCGG AAAACTGCTG GCACAATCGG CCTAG
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Protein sequence | MSRGKAAIPL DLPCPAGLST GTPQSKQECI ADAIRDAILK RLLPGDSPLP SSRTLAARWS VARGTVEAAY DRLSSEGYIA RTRGSGSRVC AIVPDSYLRA SAQPRDGAPR RPGTAPEPEP TGAAAPEHAV RPGVPFVARL ADPGLLPMQQ WKKALGASLL AATPNDLGST PSQGVEGLRD EIAAYLREYR GIPCEADDIF ITTGIRHSID LVARTVLTPG STVLMEDPGY ASAWHIFTMA AATVIDVPVD REGIQTATLD LHDDACAAYV TPAHQAPLGV TMSVSRRLEL LDWAQRNRAW IIEDDYDGEF SYQAAPLPAL KSLDACERVI YCGSFNKTLF SGLRIGFMVV PAELRPALSV VWHATARSVS VAPQLALARF IGHGDFAKHL RACRHAYRQR RDIVLDQLAT HASGQFTVSG EHAGFHFVLG LPPAMDEASY VARARTAGIA LQALSGFCRS TRCEPGVVVG YSALTAAHAR HGGRILGKLL AQSA
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