| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3663 |
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| Symbol | |
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| ID | 4312559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 508545 |
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| End bp | 509636 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151505 |
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| Product | porin |
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| Protein accession | YP_775551 |
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| Protein GI | 115358413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.107889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.482694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAC GCGCAGAACG TTCGATTCGC ACTGCTATCG TTACCGGCTC GGCTGCCGTC
GCCGGCCTCG CAGTAGGCGC CGCGCACGCG CAGTCGTCGG TCACGATGTA CGGGATCATG
GATGCCGGCA TCGAATACAC GAACCATGCG GCACCCGACG GCGGCAATTC GTTCAAGCTG
AAATCCGGCA ACAAGAACAC GTCGCGCTGG GGCTTGCGCG GCACCGAGGA TCTCGGCGGC
GGGCTGAAGG CCGTGTTCCG CCTCGAAAGC GGGATCGATC TCGCCAACGG TGCGTCCGAC
GACGGCCCCG ACTCGATCTT CGCGCGCCGC GCGACGGTCG GCCTGAAAGG CAAGTGGGGC
GAAGTCTCGC TCGGCCGCAA CTTCACGGTC ACCTACGACT ACATGCTGCC GTTCGACCCG
ATGGGCTACG CGCAGAACTA CTCGTGGGCG ACTTCGTCGA TGGCGACCGG CGGCCGCAAG
GACGGCCTGT TCACGCGTTC GTCGAACGCC GTGCGCTACG ACGGCGAATT CGGCGGCTTC
AAGTTCGGCG CGCTGTACGG CTTCGGCAAC GTACCGGGCA GCGTGAAGAC CAGCTCGAAG
TACGACTTCG CGCTCGGCTA CGAGGCCGGC CCGTTCGCGG CGGTGGTCAC GTTCGACCGG
CAGAACGGCG CAGCCGACAG CGTCACGCCG GCCGATACCG TCAACTACAT CCAGGGAATC
CATGCGGGCC TGAGCTACGA CTTCGGCAAC CTGAAGACGA TGGCCGGCTA TCGCAACTAT
CGGCGCACGT ATCACACGAG CGCCGCGAAC CAGTTGAGCG ACATGTATTG GGTCGGCGGG
TCGTACCAGT TCACGCCGAC GTTCTCGCTG ATCGCGGCCG TCTATCACCA GAACATCAAG
GGCGGCACGG ATGCGGATCC GACGCTGGTG TCGGTGCGGG CGAACTATGC ACTGTCGAAG
CGCACGGTGC TGTATGCGGC CGGCGCGTTC GCGATCGCGC AGCATGGGCA GAAGGTCGGT
GTGTCGCGCG ATTTCGCCGG GTATGGCACC ACGCAGGTGG GTGTGACGGC GGGGATTCAG
CAGCGGTTCT GA
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| Protein sequence | MKSRAERSIR TAIVTGSAAV AGLAVGAAHA QSSVTMYGIM DAGIEYTNHA APDGGNSFKL
KSGNKNTSRW GLRGTEDLGG GLKAVFRLES GIDLANGASD DGPDSIFARR ATVGLKGKWG
EVSLGRNFTV TYDYMLPFDP MGYAQNYSWA TSSMATGGRK DGLFTRSSNA VRYDGEFGGF
KFGALYGFGN VPGSVKTSSK YDFALGYEAG PFAAVVTFDR QNGAADSVTP ADTVNYIQGI
HAGLSYDFGN LKTMAGYRNY RRTYHTSAAN QLSDMYWVGG SYQFTPTFSL IAAVYHQNIK
GGTDADPTLV SVRANYALSK RTVLYAAGAF AIAQHGQKVG VSRDFAGYGT TQVGVTAGIQ
QRF
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